Propionibacterium freudenreichii JS12a |
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Putative Propionibacterium freudenreichii JS12a RM systems
Ref: Laine,P.K.S. unpublished
REBASE ref # 21841
Complete sequence: 2,613,734 bp
GenBank #: LT576787
REBASE acronym: PfrJS12a
Org_num: 25943
All begin PFR_JS12-2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2107 | PltJ | |||
| ??? | M | M.PfrJS12I (100% identity) | GCANNNNNNRTGA | M.PfrJS12aI |
| 2109 | S | S.PfrJS12I (100% identity) | GCANNNNNNRTGA | S.PfrJS12aI |
| 2110 | R | PfrJS12IP (100% identity) | GCANNNNNNRTGA | PfrJS12aIP |
| 2111 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 224 | 91 aa Hypothetical protein | |||
| 225 | RM | PfrJS12V (100% identity) | GGCGGAG | PfrJS12aV |
| 226 | Transposase (ISH10) | |||
| 1384 | Antirestriction protein | |||
| ??? | M | M.PfrJS12III (100% identity) | GGGCCC | M.PfrJS12aIII |
| 1386 | R | PfrJS12IIIP (100% identity) | GGGCCC | PfrJS12aIIIP |
| 1387 | 398 aa Hypothetical protein | |||
| 1502 | DNA repair ATPase | |||
| 1503 | RM | PfrJS12IV (100% identity) | TANAAG | PfrJS12aIV |
| 1504 | lysogenic conversion protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1923 | Transporter, anaerobic C4-dicarboxylate uptake | |||
| ??? | R | PfrJS12ORF1925P (100% identity) | PfrJS12aORF1924P | |
| 1925 | Transposase IS6110 | |||
| 1954 | Protein of hypothetical function DUF299 | |||
| 1955 | R | PfrTL29Mrr3P (100% identity) | PfrJS12aMrrP | |
| 1956 | MATE efflux family protein | |||