Ref: Jung,J. et al. unpublished

REBASE ref # 26001

Complete sequence: 4,116,543 bp

GenBank #: CP025938

REBASE acronym: TspUJ94

Org_num: 27218

 

All begin C1A40_

Type I
ORF Gene Most similar Specificity Name
 
5510 447 aa hypothetical protein
5515 R Esp3007ORFDP (60% identity) TspUJ94ORF5525P
5520 S S.YpsEP2ORF1556P (40% identity) S.TspUJ94ORF5525P
5525 M M.FspL2A11ORFAP (70% identity) M.TspUJ94ORF5525P
5530 DNA recombination protein RmuC
 
6350 67 aa hypothetical protein
6355 R Oho17368ORF3274P (69% identity) GRTANNNNGNNGTC TspUJ94IIP
6360 270 aa hypothetical protein
6365 298 aa hypothetical protein
6370 S S.NurNm15ORF2084P (37% identity) GRTANNNNGNNGTC S.TspUJ94II
6375 M M.Oho17368ORF3274P (87% identity) GRTANNNNGNNGTC M.TspUJ94II
6380 endonuclease
 
11040 ATPase
11045 M M.Tsps12ORF15120P (99% identity) M.TspUJ94ORF11045P
11050 S S.Fpe19366ORF12905P (42% identity) S.TspUJ94ORF11045P
11055 CAAX protease
11060 R Tsps12ORF15120P (99% identity) TspUJ94ORF11045P
11065 endonuclease
 
11945 244 aa hypothetical protein
11950 R CspKLAORF16557P (85% identity) TspUJ94ORF11970P
11955 S S.CspKLAORF16557P (53% identity) S.TspUJ94ORF11970P
11960 IS982 family transposase
11965 550 aa hypothetical protein
11970 M M.Wsp326ORF13920P (83% identity) M.TspUJ94ORF11970P
11975 IS30 family transposase
 
15940 type II toxin-antitoxin system PemK/MazF family
15945 C C.Ale2010ORFFP (92% identity) C.TspUJ94ORF15945P
15950 DNA methyltransferase
 
17800 NAD(P)H-dependent oxidoreductase
17810 R Psp333ORF11835P (91% identity) GAANNNNNNRTGT TspUJ94IP
17815 four helix bundle protein
17820 S S.Pmu2192ORF8015P (46% identity) GAANNNNNNRTGT S.TspUJ94I
17825 cell filamentation protein Fic
17830 M M.Psp333ORF11835P (92% identity) GAANNNNNNRTGT M.TspUJ94I
17835 addiction module protein
Type II
ORF Gene Most similar Specificity Name
 
14030 thymidylate synthase
14035 M M.Bar59ORF800P (72% identity) M.TspUJ94ORF14035P
14040 DUF885 domain-containing protein
 
15945 transcriptional regulator
15950 RM LspLP1ORF2670P (52% identity) TspUJ94ORF15950P
15955 ATP-binding protein
Type IV
ORF Gene Most similar Specificity Name
 
5085 DNA mismatch repair protein MutT
5090 R FhaMA1ORFBP (90% identity) TspUJ94ORF5090P
5095 type II toxin-antitoxin system ParD family
 
5490 transcriptional regulator
5495 R TspUJ94McrC2P (100% identity) TspUJ94McrCP
??? R EspSCS36McrBP (78% identity) TspUJ94McrBP
5505 706 aa hypothetical protein
 
5490 transcriptional regulator
5495 R TspUJ94McrCP (100% identity) TspUJ94McrC2P
5500 R TspUJ94McrBP (44% identity) TspUJ94McrB2P
5505 706 aa hypothetical protein