Porphyromonas gingivalis W83 |
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Putative Porphyromonas gingivalis W83 RM systems
Ref: Acuna-Amador,L. et al. BMC Genomics 19 (1), 54 (2018)
REBASE ref # 25995
Complete sequence: 2,343,999 bp
GenBank #: CP025932
REBASE acronym: PgiW83
Org_num: 27203
All begin CF003_, CF003_n, CF003_t
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 541 | 95 aa hypothetical protein | |||
| ??? | C | C.Pin2866ORF2135P (100% identity) | C.PgiW83ORF544P | |
| 544 | M | M.Pin2866ORF2135P (100% identity) | M.PgiW83ORF544P | |
| 545 | S | S.PgiTORF544P (98% identity) | S.PgiW83ORF544P | |
| 547 | ATPase component of energizing module of biotin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 864 | invertase | |||
| ??? | RM | RM2.PgiW50ORF3930P (100% identity) | PgiW83ORFAP | |
| 862 | type IIS restriction endonuclease | |||
| ??? | type IIS restriction endonuclease | |||
| 862 | RM | RM1.PgiW50ORF3930P (100% identity) | PgiW83ORF862P | |
| 861 | ATP-dependent helicase | |||
| 30 | 215 aa hypothetical protein | |||
| 1469 | RM | PgiW50ORF6620P (100% identity) | PgiW83ORF1469P | |
| 1470 | 76 aa hypothetical protein | |||
| 1694 | aminodeoxychorismate lyase | |||
| 1696 | RM | Pin2903ORF8480AP (100% identity) | PgiW83ORF1696AP | |
| 1697 | RM | PgiW50ORF7670P (100% identity) | PgiW83ORF1696BP | |
| 1701 | Zn-dependent dipeptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 973 | alpha-12-mannosidase | |||
| 972 | R | PgiW50McrCP (100% identity) | PgiW83McrCP | |
| 971 | R | PgiW50McrBP (100% identity) | PgiW83McrBP | |
| 970 | transposase in ISPg4 | |||
| 22 | pseudogene | |||
| 968 | R | PgiW50MrrP (100% identity) | PgiW83MrrP | |
| 965 | phosphatidylserine decarboxylase proenzyme | |||