Ref: Jimenez,E. et al. unpublished

REBASE ref # 12080

Sequence length:GenBank #:
Chromosome: 1,828,169 bp CP002034
plasmid pHN3: 242,962 bp CP002037

REBASE acronym: LsaC

Org_num: 6097

 

All begin HN6_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
756 Cellobiose PTS, EIIC
757 S S.LsaSORF915P (92% identity) S1.LsaCORF761P
??? S S.LsaSORF916P (70% identity) S2.LsaCORF761P
759 DNA integration/recombination/inversion protein
760 S S.LsaSORF917P (90% identity) S3.LsaCORF761P
761 M M.Lsa210215ORF5130P (100% identity) M.LsaCORF761P
??? R LsaLPM01ORFAP (97% identity) LsaCORF761P
764 Phosphatidylglycerophosphatase B
 
plasmid pHN3
 
1535 uncharacterized protein
1536 M M.Lsa51ORF9059P (96% identity) M.LsaCORF1536P
??? Adenine specific DNA methylase Mod
Type II
ORF Gene Most similar Specificity Name
 
plasmid pHN3
 
1597 uncharacterized protein
1598 S S.LsaSORF1830P (100% identity) S.LsaCORF1599P
1599 RM LsaSORF1830P (100% identity) LsaCORF1599P
1600 Possible surface protein A
Type III
ORF Gene Most similar Specificity Name
 
plasmid pHN3
 
1536 Modification subunit
??? M M1.LsaSORF1758eP (100% identity) M1.LsaCORFAP
??? M M2.LsaSORF1758eP (100% identity) M2.LsaCORFAP
??? M M3.LsaSORF1758eP (100% identity) M3.LsaCORFAP
1543 R LsaSORF1758eP (100% identity) LsaCORFAP
1544 uncharacterized protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
834 Alpha-galactosidase
835 R Lsa210215ORF5550P (99% identity) LsaCORF835P
836 Transposase ISLasa4c, ISL3 family
 
1208 Inosine-5-monophosphate dehydrogenase
1209 R Lsa210215ORF7755P (77% identity) LsaCORF1209P
1210 DNA/RNA helicase, DEAD/DEAH box family
 
1209 DNA/RNA helicase, DEAD/DEAH box family
1210 R DNA/RNA helicase, DEAD/DEAH box family LsaCORF1210P
1211 Protein tyrosine phosphatase