|
Putative Nitrosococcus watsoni C-113 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11851
Sequence length: | GenBank #: | |
Chromosome: | 3,328,570 bp | CP002086 (NC_014315) |
plasmid pNWAT01: | 39,105 bp | CP002087 (NC_014316) |
REBASE acronym: NwaC
Org_num: 6088
All begin Nwat_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
150 | sodium/hydrogen exchanger | |||
151 | R | type I site-specific restriction-modification | NwaCORF151P | |
152 | Succinylglutamate desuccinylase/aspartoacylase | |||
195 | pseudogene | |||
196 | M | M.NwaD1FHSORF17515P (88% identity) | M.NwaCORF196P | |
197 | S | S2.GprSS5ORF8980P (72% identity) | S.NwaCORF196P | |
198 | 176 aa conserved hypothetical protein | |||
199 | 61 aa conserved hypothetical protein | |||
200 | R | TspCOW1ORF660P (87% identity) | NwaCORF196P | |
201 | Integrase | |||
427 | short-chain dehydrogenase/reductase SDR | |||
428 | R | NocAORF2687P (97% identity) | NwaCORF430P | |
429 | S | S.Pva24199ORF16515P (58% identity) | S.NwaCORF430P | |
430 | M | M.NocAORF2687P (97% identity) | M.NwaCORF430P | |
431 | FlgN family protein | |||
1302 | 5-nucleotidase | |||
1303 | M | M.MspP4B1ORF1545P (92% identity) | M.NwaCORF1303P | |
1304 | S | S.Eac14ORFEP (43% identity) | S.NwaCORF1303P | |
1305 | filamentation induced by cAMP protein Fic | |||
1306 | R | MaqORF3380P (90% identity) | NwaCORF1303P | |
1307 | pseudogene | |||
1818 | 52 aa hypothetical protein | |||
1819 | R | NocAORF1201P (94% identity) | NwaCORF1822P | |
1820 | S | S.NocAORF1201P (60% identity) | S.NwaCORF1822P | |
1821 | DNA polymerase beta domain protein region | |||
1822 | M | M.NocAORF1201P (96% identity) | M.NwaCORF1822P | |
1823 | 117 aa hypothetical protein | |||
2422 | Uncharacterized protein | |||
2423 | M | M.BicMT13ORF3265P (75% identity) | M.NwaCORF2423P | |
2424 | S | S.TspARh3II (39% identity) | S.NwaCORF2423P | |
2425 | R | Ncr49181ORF2186P (78% identity) | NwaCORF2423P | |
2426 | 78 aa hypothetical protein | |||
2989 | 215 aa conserved hypothetical protein | |||
2990 | M | M.NocAORF2903P (92% identity) | M.NwaCORF2990P | |
2991 | S | S1.Ifl194ORF20490P (28% identity) | S.NwaCORF2990P | |
2992 | Uncharacterized protein | |||
2993 | nucleotidyltransferase substrate binding | |||
2994 | DNA polymerase beta domain protein region | |||
2995 | 99 aa hypothetical protein | |||
2996 | transposase, IS605 OrfB family | |||
2998 | R | NocAORF2903P (96% identity) | NwaCORF2990P | |
2999 | protein of unknown function DUF45 | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
46 | S23 ribosomal protein | |||
47 | M | M.MinV4ORF325P (66% identity) | M.NwaCORF47P | |
48 | ATP-binding region, ATPase-like protein | |||
603 | 118 aa conserved hypothetical protein | |||
604 | M | M.NwaD1FHSORF1055P (76% identity) | M.NwaCORF604P | |
605 | Ribonucleoside-diphosphate reductase | |||
2681 | 55 aa hypothetical protein | |||
2682 | M | M.NocAORF419P (96% identity) | GANTC | M.NwaCORF2682P |
2683 | 105 aa conserved hypothetical protein | |||
2758 | thioredoxin reductase | |||
2759 | M | M.NocADamP (93% identity) | GATC | M.NwaCORF2759P |
2760 | 383 aa conserved hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1645 | transcriptional regulator, LysR family | |||
1646 | R | Restriction endonuclease | NwaCORF1649P | |
1647 | 74 aa conserved hypothetical protein | |||
1648 | pseudogene | |||
1649 | M | M.CspSK3ORF65P (61% identity) | M.NwaCORF1649P | |
1650 | peptidase M28 | |||
2925 | Methyltransferase type 11 | |||
2926 | R | NocAORF2928P (91% identity) | NwaCORF2929P | |
2927 | Abi family protein | |||
2928 | 57 aa hypothetical protein | |||
2929 | M | M.Esp9520ORFDP (40% identity) | M.NwaCORF2929P | |
2930 | 130 aa conserved hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pNWAT01 | ||||
3182 | pseudogene | |||
3183 | R | NocNS58MrrP (100% identity) | NwaCMrrP | |
3184 | 135 aa conserved hypothetical protein |