Ralstonia solanacearum CMR15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ralstonia solanacearum CMR15 RM systems
Ref: Remenant,B. et al. BMC Genomics 11 (1), 379 (2010)
REBASE ref # 10128
| Sequence length: | GenBank #: | |
| Chromosome: | 3,596,030 bp | FP885895 |
| plasmid CMR15_mp: | 1,959,334 bp | FP885896 |
| plasmid pRSC35: | 35,008 bp | FP885893 |
REBASE acronym: RsoCMR15
Org_num: 6080
All begin CMR15_, CMR15_mp, CMR15_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10018 | conserved protein of unknown function | |||
| 10019 | R | Bps15486ORF32005P (95% identity) | RsoCMR15ORF10022P | |
| 10020 | S | S2.PfuZS1ORF35P (53% identity) | S1.RsoCMR15ORF10022P | |
| 10021 | S | S.Par2038ORFFP (18% identity) | S2.RsoCMR15ORF10022P | |
| 10022 | M | M.Bps15486ORF32005P (92% identity) | M.RsoCMR15ORF10022P | |
| 10023 | protein of unknown function | |||
| 10072 | HTH-type transcriptional regulator nsrR | |||
| 10073 | M | M.Rso239ORF1150027P (96% identity) | M.RsoCMR15ORF10073P | |
| 10074 | conserved protein of unknown function | |||
| 10075 | R | Rps9673ORF7930P (84% identity) | RsoCMR15ORF10073P | |
| 10076 | sensor histidine kinase | |||
| 30584 | conserved protein of unknown function | |||
| 30585 | R | BpsBD5ORF14450P (93% identity) | RsoCMR15ORF30587P | |
| 30586 | S | S.Bps491II (65% identity) | S.RsoCMR15ORF30587P | |
| 30587 | M | M.Ppn3I (89% identity) | M.RsoCMR15ORF30587P | |
| 30588 | conserved protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10476 | protein of unknown function | |||
| 10477 | R | Bce384ORF30P (83% identity) | RGGWCCY | RsoCMR15ORF10478P |
| 10478 | M | M.Bce384ORF30P (91% identity) | RGGWCCY | M.RsoCMR15ORF10478P |
| 10479 | protein of unknown function | |||
| 11392 | tryptophan synthase, beta subunit | |||
| 11393 | M | M.Rso386ORF8980P (100% identity) | M.RsoCMR15ORF11393P | |
| 11394 | tryptophan synthase, alpha chain | |||
| 20260 | conserved protein of unknown function | |||
| 20261 | M | M2.AphV1ORF50P (55% identity) | M.RsoCMR15ORF20261P | |
| 20262 | Site-specific DNA-methyltransferase | |||
| 30042 | conserved protein of unknown function (fragment | |||
| 30043 | M | M.Rso231ORF880004P (94% identity) | M1.RsoCMR15ORF30043P | |
| 30044 | M | M.Rps2340ORFBP (76% identity) | M2.RsoCMR15ORF30043P | |
| 30045 | conserved protein of unknown function | |||
| plasmid CMR15_mp | ||||
| 10532 | conserved hypothethical protein | |||
| ??? | M | dna modification methylase protein | M.RsoCMR15ORF10533P | |
| 10535 | hypothethical protein | |||
| plasmid pRSC35 | ||||
| 20 | conserved hypothethical protein | |||
| 21 | M | M.Bps3253ORF6025P (95% identity) | GGCGCC | M.RsoCMR15ORF21P |
| 22 | R | BpsBP2ORF13025P (91% identity) | GGCGCC | RsoCMR15ORF21P |
| 23 | V | V.Bps3253ORF6025P (73% identity) | V.RsoCMR15ORF21P | |
| 24 | hypothethical protein | |||