Ref: Remenant,B. et al. BMC Genomics 11 (1), 379 (2010)

REBASE ref # 10128

Sequence length:GenBank #:
Chromosome: 3,596,030 bp FP885895
plasmid CMR15_mp: 1,959,334 bp FP885896
plasmid pRSC35: 35,008 bp FP885893

REBASE acronym: RsoCMR15

Org_num: 6080

 

All begin CMR15_, CMR15_mp, CMR15_p

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
10018 conserved protein of unknown function
10019 R Bps15486ORF32005P (0% identity) RsoCMR15ORF10022P
10020 S S.Pae1092ORF6505P (0% identity) S1.RsoCMR15ORF10022P
10021 S S.Pae1092ORF6505P (0% identity) S2.RsoCMR15ORF10022P
10022 M M.Bps15486ORF32005P (0% identity) M.RsoCMR15ORF10022P
10023 protein of unknown function
 
10072 HTH-type transcriptional regulator nsrR
10073 M M.Rso239ORF1150027P (0% identity) M.RsoCMR15ORF10073P
10074 conserved protein of unknown function
10075 R Rso231ORF430025P (0% identity) RsoCMR15ORF10073P
10076 sensor histidine kinase
 
30584 conserved protein of unknown function
30585 R Bps166ORF4706P (0% identity) RsoCMR15ORF30587P
30586 S S.Bps491II (0% identity) S.RsoCMR15ORF30587P
30587 M M.Ppn3I (0% identity) M.RsoCMR15ORF30587P
30588 conserved protein of unknown function
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
10476 protein of unknown function
10477 R Bce384ORF30P (0% identity) RGGWCCY RsoCMR15ORF10478P
10478 M M.Bce384ORF30P (0% identity) RGGWCCY M.RsoCMR15ORF10478P
10479 protein of unknown function
 
11392 tryptophan synthase, beta subunit
11393 M M.Rso231ORF1310005P (1% identity) M.RsoCMR15ORF11393P
11394 tryptophan synthase, alpha chain
 
20260 conserved protein of unknown function
20261 M M2.AphV1ORF50P (0% identity) M.RsoCMR15ORF20261P
20262 Site-specific DNA-methyltransferase
 
30042 conserved protein of unknown function (fragment
30043 M M.Rso231ORF880004P (0% identity) M1.RsoCMR15ORF30043P
30044 M M1.Rso44ORF1713P (0% identity) M2.RsoCMR15ORF30043P
30045 conserved protein of unknown function
 
plasmid CMR15_mp
 
10532 conserved hypothethical protein
??? M M1.Rso163ORF125P (0% identity) M.RsoCMR15ORF10533P
10535 hypothethical protein
 
plasmid pRSC35
 
20 conserved hypothethical protein
21 M M.Bps46776ORF2670P (0% identity) GGCGCC M.RsoCMR15ORF21P
22 R BpsBP2ORF13025P (0% identity) GGCGCC RsoCMR15ORF21P
23 V V.Bps46776ORF2670P (0% identity) V.RsoCMR15ORF21P
24 hypothethical protein