Paracoccus species CBA4604 |
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Putative Paracoccus species CBA4604 RM systems
Ref: Roh,S.W. et al. unpublished
REBASE ref # 25554
Complete sequence: 3,121,136 bp
GenBank #: CP025583
REBASE acronym: Psp4604
Org_num: 26999
All begin CYR75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4040 | 383 aa hypothetical protein | |||
| 4045 | S | S.Pko0001ORF8370P (94% identity) | GAGNNNNNNGCTG | S.Psp4604II |
| 4050 | M | M.RbaLa6ORF6077P (96% identity) | GAGNNNNNNGCTG | M.Psp4604II |
| 4055 | R | Pst25392ORF6880P (99% identity) | GAGNNNNNNGCTG | Psp4604IIP |
| 4060 | 131 aa hypothetical protein | |||
| 4655 | amidohydrolase | |||
| 4660 | M | M.AspCSR2ORFAP (91% identity) | TGAANNNNNTGG | M.Psp4604III |
| 4665 | S | S.Pye32053ORF4698P (46% identity) | TGAANNNNNTGG | S.Psp4604III |
| 4670 | 379 aa hypothetical protein | |||
| 4675 | R | AspCSR2ORFAP (83% identity) | TGAANNNNNTGG | Psp4604IIIP |
| 4680 | 231 aa hypothetical protein | |||
| 6085 | IS110 family transposase | |||
| 6090 | R | Rin26383ORF1902P (90% identity) | Psp4604ORF6105P | |
| 6095 | S | S.Ano17248ORF14435P (27% identity) | S.Psp4604ORF6105P | |
| 6100 | DUF4357 domain-containing protein | |||
| 6105 | M | M.Rin26383ORF1902P (89% identity) | M.Psp4604ORF6105P | |
| 6110 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 400 | 60 aa hypothetical protein | |||
| 405 | M | M1.PspD09ORF14660P (80% identity) | M.Psp4604ORF405P | |
| 410 | DNA methylase | |||
| 405 | DNA cytosine methyltransferase | |||
| 410 | M | M.PcoRK1ORF2590P (78% identity) | M.Psp4604ORF410P | |
| 415 | RNA polymerase subunit sigma | |||
| 455 | 249 aa hypothetical protein | |||
| 460 | V | V.Rsp17029ORF3387P (79% identity) | V.Psp4604ORF470P | |
| 465 | R | Rsp17029ORF3387P (92% identity) | Psp4604ORF470P | |
| 470 | M | M.Rsp17029ORF3387P (91% identity) | M.Psp4604ORF470P | |
| 475 | 142 aa hypothetical protein | |||
| 4140 | RNA polymerase subunit sigma | |||
| 4145 | M | M2.Szo19623ORF16935P (95% identity) | M.Psp4604ORF4145P | |
| 4150 | 74 aa hypothetical protein | |||
| 4490 | 142 aa hypothetical protein | |||
| 4495 | M | M.Hdu456ORF14345P (97% identity) | M.Psp4604ORF4495P | |
| 4500 | 70 aa hypothetical protein | |||
| 4625 | 83 aa hypothetical protein | |||
| 4630 | V | V.CbaLH4ORF6040P (89% identity) | V.Psp4604ORF4635P | |
| 4635 | M | M.Psp64ORFBP (92% identity) | M.Psp4604ORF4635P | |
| 4640 | 333 aa hypothetical protein | |||
| 9985 | ribonuclease HII | |||
| 9990 | M | M.Psp80058ORF13760P (93% identity) | GANTC | M.Psp4604I |
| 9995 | alkane 1-monooxygenase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 800 | CHRD domain-containing protein | |||
| 805 | R | RsaMcrCP (94% identity) | Psp4604McrCP | |
| ??? | R | SspJK71McrBP (39% identity) | Psp4604McrBP | |
| 815 | cell filamentation protein Fic | |||