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Putative Rhodococcus ruber YYL RM systems
Ref: Lu,Z. et al. unpublished
REBASE ref # 25542
Sequence length: | GenBank #: | |
Chromosome: | 5,592,192 bp | CP024890 |
plasmid pYYL1.1: | 236,354 bp | CP024892 |
REBASE acronym: RruYYL
Org_num: 26976
All begin CSW53_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10535 | IS5/IS1182 family transposase | |||
10540 | R | RaeN1ORF13025P (93% identity) | RruYYLORF10550P | |
??? | S | S.Rer2895ORF60100P (24% identity) | S.RruYYLORF10550P | |
10550 | M | M.RaeN1ORF13025P (94% identity) | M.RruYYLORF10550P | |
10555 | DUF4268 domain-containing protein | |||
20260 | 453 aa hypothetical protein | |||
20265 | R | RspDMF1ORF17880P (99% identity) | RruYYLORF20265P | |
20270 | 160 aa hypothetical protein | |||
20315 | 267 aa hypothetical protein | |||
20320 | S | S.RspAHZY2ORF21085P (100% identity) | GTGANNNNNNTGG | S.RruYYLI |
20325 | M | M.Rru231ORF830055P (99% identity) | GTGANNNNNNTGG | M.RruYYLI |
20330 | 690 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18090 | 78 aa hypothetical protein | |||
18095 | M | M.Nsa1ORF27280P (66% identity) | M.RruYYLORF18095P | |
18100 | 60 aa hypothetical protein | |||
24990 | sulfite exporter TauE/SafE family protein | |||
24995 | V | V.RspP14ORFGP (100% identity) | V.RruYYLORF25000P | |
??? | M | M.RruSD3ORF1465P (100% identity) | M.RruYYLORF25000P | |
25005 | 82 aa hypothetical protein | |||
plasmid pYYL1.1 | ||||
27175 | 387 aa hypothetical protein | |||
27180 | R | Naq9944ORF3003P (81% identity) | RruYYLORF27185P | |
??? | M | M.PspYJ56ORF23620P (55% identity) | M.RruYYLORF27185P | |
27195 | integrase |