Escherichia coli 14EC001 |
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Putative Escherichia coli 14EC001 RM systems
Ref: Li,B. and Wang,X. unpublished
REBASE ref # 21064
| Sequence length: | GenBank #: | |
| Chromosome: | 5,072,975 bp | CP024127 |
| plasmid p14EC001b: | 123,884 bp | CP024129 |
REBASE acronym: Eco001
Org_num: 26927
All begin CR534_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23530 | restriction endonuclease | |||
| 23535 | R | SflFF12ORF17265P (57% identity) | Eco001ORF23535P | |
| 23540 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1960 | cell division protein DamX | |||
| 1965 | M | DNA adenine methylase | GATC | M.Eco001DamP |
| 1970 | ribulose-phosphate 3-epimerase | |||
| 2645 | DUF2556 domain-containing protein | |||
| 2650 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco001ORF2650P |
| 2655 | Fis family transcriptional regulator | |||
| 10375 | phosphohydrolase | |||
| 10380 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco001DcmP |
| 10385 | V | V.SflN116DcmP (100% identity) | V.Eco001DcmP | |
| 10390 | drug/metabolite exporter YedA | |||
| 15510 | sialate O-acetylesterase | |||
| 15530 | M | M.SflFF12ORF4115P (100% identity) | M.Eco001ORF15530P | |
| 15535 | 106 aa hypothetical protein | |||
| 20080 | 64 aa hypothetical protein | |||
| 20085 | M | M.EcoZ247ORF23540P (79% identity) | M.Eco001ORF20085P | |
| 20090 | IS3 family transposase | |||
| 21670 | phage holin, lambda family | |||
| 21675 | M | M.EcoSTEC413ORF8565P (100% identity) | M.Eco001ORF21675P | |
| 21680 | TrmB family transcriptional regulator | |||
| 21985 | cell division protein ZapA | |||
| 21990 | M | M.Sbo812ORFAP (99% identity) | M.Eco001ORF21990P | |
| 21995 | DUF1317 domain-containing protein | |||
| plasmid p14EC001b | ||||
| 28050 | 73 aa hypothetical protein | |||
| 28055 | M | M.SflFF12ORF24800P (100% identity) | M.Eco001ORF28055P | |
| 28060 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21495 | 89 aa hypothetical protein | |||
| 21500 | R | EcoMB15GmrSDP (100% identity) | Eco001GmrSDP | |
| 21505 | DNA invertase | |||
| 23525 | GTPase | |||
| 23530 | R | Ssp28760MrrP (100% identity) | Eco001MrrP | |
| 23535 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8810 | recombination protein NinB | |||
| 8815 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco001ORF8815P |
| 8820 | NinE family protein | |||