Vibrio harveyi 345 |
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Putative Vibrio harveyi 345 RM systems
Ref: Feng,J. unpublished
REBASE ref # 24992
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,713,225 bp | CP025537 |
| plasmid p345-185: | 185,327 bp | CP025539 |
REBASE acronym: Vha345
Org_num: 27013
All begin CU052_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10555 | bacterioferritin comigratory protein | |||
| 10560 | R | SspLC6ORF22905P (97% identity) | GGYAYNNNNNTGA | Vha345IIP |
| 10565 | DUF1016 domain-containing protein | |||
| ??? | S | S2.VpoC121ORF970P (57% identity) | GGYAYNNNNNTGA | S.Vha345II |
| 10575 | M | M.Vch69ORF1407P (97% identity) | GGYAYNNNNNTGA | M.Vha345II |
| 10580 | 196 aa hypothetical protein | |||
| 17260 | ATP-binding protein | |||
| 17265 | R | Vsi48ORF16075P (98% identity) | TCCNNNNNGTCA | Vha345IP |
| 17270 | S | S.DafPCSORF211P (29% identity) | TCCNNNNNGTCA | S.Vha345I |
| 17275 | M | M2.VspVB16ORF10310P (91% identity) | TCCNNNNNGTCA | M2.Vha345I |
| 17280 | 290 aa hypothetical protein | |||
| 17285 | M | M1.Vvu2444ORFEP (97% identity) | TCCNNNNNGTCA | M1.Vha345I |
| 17290 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1320 | 441 aa hypothetical protein | |||
| ??? | M | M.Vhafi2ORFAP (100% identity) | M.Vha345ORFAP | |
| 1330 | NupC/NupG family nucleoside CNT transporter | |||
| 6160 | 140 aa hypothetical protein | |||
| 6165 | M | M.VpeNU1ORFCP (85% identity) | M.Vha345ORFHP | |
| 6170 | R | VpeNU1ORFCP (88% identity) | Vha345ORFHP | |
| 6175 | 347 aa hypothetical protein | |||
| 7950 | cell division protein DamX | |||
| 7955 | M | M.Vsp43155DamP (100% identity) | GATC | M.Vha345III |
| 7960 | ribulose-phosphate 3-epimerase | |||
| plasmid p345-185 | ||||
| 28210 | 148 aa hypothetical protein | |||
| ??? | M | M.VowVC2WORF33040P (94% identity) | CTGCAG | M.Vha345IV |
| 28220 | R | VowVC2WORF33040P (100% identity) | CTGCAG | Vha345IVP |
| 28225 | 359 aa hypothetical protein | |||
| 28380 | 91 aa hypothetical protein | |||
| 28385 | M | M.Vpa0051ORF27435P (100% identity) | M.Vha345ORFJP | |
| 28390 | 80 aa hypothetical protein | |||
| ??? | M | M.Vsp90ORFAP (76% identity) | M.Vha345ORFLP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16830 | 418 aa hypothetical protein | |||
| 16835 | M | M.PphP69ORF19205P (89% identity) | AGCACY | M.Vha345V |
| 16840 | R | VpaHA2ORF1130P (99% identity) | AGCACY | Vha345VP |
| 16845 | DUF2913 domain-containing protein | |||