Beggiatoa leptomitoformis species nov. D-401 |
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Putative Beggiatoa leptomitoformis species nov. D-401 RM systems
Ref: Fomenkov,A. et al. unpublished
REBASE ref # 24166
Complete sequence: 4,266,350 bp
GenBank #: CP018889
REBASE acronym: Ble401
Org_num: 19710
All begin BLE401_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4575 | DUF45 domain-containing protein | |||
| 4570 | R | Ble402IVP (100% identity) | ATTAYNNNNNCTG | Ble401IVP |
| 4565 | S | S.Ble402IV (100% identity) | ATTAYNNNNNCTG | S.Ble401IV |
| 4560 | M | M.Ble402IV (100% identity) | ATTAYNNNNNCTG | M.Ble401IV |
| 4555 | 175 aa hypothetical protein | |||
| 17410 | PaaI family thioesterase | |||
| 17405 | M | M.Ble402VI (100% identity) | M.Ble401ORF17405P | |
| 17400 | S | S.Ble402VI (100% identity) | S.Ble401ORF17405P | |
| 17395 | R | Ble402VIP (100% identity) | Ble401ORF17405P | |
| 17390 | PQQ-dependent dehydrogenase, methanol/ethanol | |||
| 16775 | IS5 family transposase | |||
| 16770 | R | Ble402VP (100% identity) | ACAYNNNNNRTGT | Ble401ORF16755P |
| 16765 | S | S.Ble402V (100% identity) | ACAYNNNNNRTGT | S.Ble401ORF16755P |
| 16760 | GxxExxY protein | |||
| 16755 | M | M.Ble402V (100% identity) | ACAYNNNNNRTGT | M.Ble401ORF16755P |
| 16750 | Fe-S cluster assembly transcriptional regulator | |||
| 9260 | pentapeptide repeat-containing protein | |||
| 9255 | M | N-6 DNA methylase | M.Ble401ORF9255P | |
| 9250 | CBS domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5965 | DUF1738 domain-containing protein | |||
| 5960 | RM | Ble402ORF115P (100% identity) | Ble401ORF5960P | |
| 5955 | endonuclease | |||
| 4820 | transposase | |||
| 4815 | R | Ble402ORF1215P (100% identity) | GCATGC | Ble401ORF4795P |
| ??? | M | 85 aa hypothetical protein | GCATGC | M.Ble401ORF4795BP |
| 18390 | IS1 family transposase | |||
| 4795 | M | M.Ble402ORF1215AP (100% identity) | GCATGC | M.Ble401ORF4795AP |
| 4790 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4605 | 120 aa hypothetical protein | |||
| ??? | R | Ble402IIIP (100% identity) | SAGCTS | Ble401IIIP |
| 4595 | M | M.Ble402III (100% identity) | SAGCTS | M.Ble401III |
| 4590 | tyrosine-type recombinase/integrase | |||
| 2660 | aminotransferase class I/II-fold pyridoxal | |||
| 2655 | RM | Ble402ORF3375P (100% identity) | Ble401ORF2655P | |
| 2650 | acetyl-CoA C-acyltransferase | |||
| 2095 | 383 aa hypothetical protein | |||
| 2090 | M | M.Ble402ORF3920P (100% identity) | TCTAGA | M.Ble401ORF2090P |
| 2085 | 122 aa hypothetical protein | |||
| 18480 | 45 aa hypothetical protein | |||
| 1620 | RM | Ble402ORF4385AP (100% identity) | Ble401ORF1605AP | |
| 1615 | IS630 family transposase | |||
| 1610 | transposase | |||
| ??? | RM | 276 aa hypothetical protein | Ble401ORF1605BP | |
| 1600 | 335 aa hypothetical protein | |||
| 18055 | carboxyvinyl-carboxyphosphonate | |||
| 18050 | M | M.Ble402ORF6255P (100% identity) | GRCGYC | M.Ble401ORF18050P |
| 18045 | R | Ble402ORF6255P (100% identity) | GRCGYC | Ble401ORF18050P |
| 18040 | 8-amino-7-oxononanoate synthase | |||
| 17610 | 191 aa hypothetical protein | |||
| 17605 | RM | Ble402ORF6700AP (100% identity) | Ble401ORF17605AP | |
| 17600 | 76 aa hypothetical protein | |||
| 17595 | PIN domain-containing protein | |||
| 17590 | RM | Ble402ORF6700BP (100% identity) | Ble401ORF17605BP | |
| 17585 | AAA family ATPase | |||
| 17270 | Trk system potassium transporter TrkA | |||
| 17265 | RM | Ble402ORF7045P (100% identity) | Ble401ORF17265P | |
| 17260 | type III toxin-antitoxin system ToxN/AbiQ family | |||
| 15835 | NTP transferase domain-containing protein | |||
| ??? | R | Ble402ORF8490P (100% identity) | CCNGG | Ble401ORF15820P |
| 15825 | IS5 family transposase | |||
| 15820 | M | M.Ble402ORF8490P (100% identity) | CCNGG | M.Ble401ORF15820P |
| 15815 | heme ABC transporter permease | |||
| 14900 | restriction endonuclease subunit R | |||
| 14895 | M | M.Ble402ORF9405P (100% identity) | M.Ble401ORF14895P | |
| 14890 | GIY-YIG nuclease family protein | |||
| 13740 | UDP-N-acetylglucosamine | |||
| 13735 | RM | Ble402ORF10540P (100% identity) | Ble401ORF13735P | |
| 13730 | 105 aa hypothetical protein | |||
| 13600 | 70 aa hypothetical protein | |||
| 13595 | M | M.Ble402I (100% identity) | GATC | M.Ble401I |
| 13590 | formylmethanofuran--tetrahydromethanopterin | |||
| 11815 | response regulator | |||
| 11810 | M | M.Ble402ORF12455P (100% identity) | AAGCTT | M.Ble401ORF11810P |
| 11570 | 108 aa hypothetical protein | |||
| 11565 | R | Ble402ORF12705P (100% identity) | Ble401ORF11560P | |
| 11560 | M | M.Ble402ORF12705P (100% identity) | RGCGCY | M.Ble401ORF11560P |
| 11555 | (Fe-S)-binding protein | |||
| 11500 | succinyl-diaminopimelate desuccinylase | |||
| 11495 | M | M.Ble402ORF12770AP (100% identity) | M.Ble401ORF11485BP | |
| 11490 | IS5 family transposase | |||
| 11485 | M | M.Ble402ORF12770BP (100% identity) | M.Ble401ORF11485AP | |
| 11480 | 128 aa hypothetical protein | |||
| 9580 | 78 aa hypothetical protein | |||
| 9575 | M | M.Ble402ORF14680P (100% identity) | M.Ble401ORF9575P | |
| 9570 | 211 aa hypothetical protein | |||
| 8860 | ATP-binding cassette domain-containing protein | |||
| 8855 | RM | Ble402II (100% identity) | GRAGCAG | Ble401II |
| 8850 | 324 aa hypothetical protein | |||
| 8230 | sensor histidine kinase | |||
| 8225 | M | M.Ble402ORF16030P (100% identity) | M.Ble401ORF8225P | |
| 8220 | lactoylglutathione lyase | |||
| 17585 | phosphate starvation-inducible protein PhoH | |||
| 17590 | RM | Ble402ORF6700BP (100% identity) | Ble401ORF17590BP | |
| 17595 | 125 aa hypothetical protein | |||
| 17600 | 76 aa hypothetical protein | |||
| 17605 | RM | Ble402ORF6700AP (99% identity) | Ble401ORF17590AP | |
| 17610 | IS630 family transposase | |||
| 6745 | RNA methyltransferase | |||
| 6740 | R | Ble402ORF17485P (100% identity) | Ble401ORF6735P | |
| 6735 | M | M.Ble402ORF17485P (100% identity) | GGNCC | M.Ble401ORF6735P |
| 6730 | tetratricopeptide repeat protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4640 | transporter substrate-binding domain-containing | |||
| 4635 | R | Ble402MrrP (85% identity) | Ble401MrrP | |
| 4630 | ATP-binding cassette domain-containing protein | |||