Paracoccus species BM15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Paracoccus species BM15 RM systems
Ref: Lee,J.-Y. unpublished
REBASE ref # 25505
| Sequence length: | GenBank #: | |
| Chromosome: | 3,759,886 bp | CP025408 |
| plasmid pBM151: | 92,522 bp | CP025409 |
| plasmid pBM152: | 81,868 bp | CP025410 |
| plasmid pBM153: | 20,460 bp | CP025411 |
REBASE acronym: PspBM15
Org_num: 26870
All begin CUV01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1290 | IS3 family transposase | |||
| ??? | S | S.Rag703ORF17310P (22% identity) | S.PspBM15ORF1300P | |
| 1300 | M | M.PspM18ORF11465P (80% identity) | M.PspBM15ORF1300P | |
| 1305 | AAA family ATPase | |||
| 2170 | 224 aa hypothetical protein | |||
| 2175 | R | Rca37b4ORF5055P (95% identity) | PspBM15ORF2190P | |
| 2180 | anticodon nuclease | |||
| 2185 | S | S.VspdhgORF11835P (48% identity) | S.PspBM15ORF2190P | |
| 2190 | M | M.Rca37b4ORF5055P (95% identity) | M.PspBM15ORF2190P | |
| 2195 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1240 | GMP synthase (glutamine-hydrolyzing) | |||
| 1245 | R | BfeH4C11ORF5165P (56% identity) | PspBM15ORF1245P | |
| 1250 | DUF72 domain-containing protein | |||
| 2195 | DNA-binding protein | |||
| 2200 | M | M1.Pfi22803ORF8335P (94% identity) | M.PspBM15ORF2200P | |
| 2205 | DUF262 domain-containing protein | |||
| 6665 | 233 aa hypothetical protein | |||
| 6670 | M | M1.Pfi22803ORF8335P (93% identity) | M.PspBM15ORF6670P | |
| 6675 | DNA cytosine methyltransferase | |||
| 6670 | DNA methylase | |||
| 6675 | M | M2.Pfi22803ORF8335P (89% identity) | M.PspBM15ORF6675P | |
| 6680 | 328 aa hypothetical protein | |||
| 6815 | 83 aa hypothetical protein | |||
| 6820 | M | M.GspLW1ORFDP (88% identity) | M.PspBM15ORF6820P | |
| 6825 | V | V.CetTSPH2ORF12285P (77% identity) | V.PspBM15ORF6820P | |
| 6830 | R | CetTSPH2ORF12285P (83% identity) | PspBM15ORF6820P | |
| 6835 | 357 aa hypothetical protein | |||
| 9705 | ribonuclease HII | |||
| 9710 | M | M.PzhJ6ORF17365P (93% identity) | M.PspBM15ORF9710P | |
| 9715 | GSCFA family protein | |||
| plasmid pBM152 | ||||
| 19125 | integrase | |||
| 19130 | R | Lsp32AORF17095P (57% identity) | PspBM15ORF19135P | |
| 19135 | M | M.PpiP14ORF3945P (66% identity) | M.PspBM15ORF19135P | |
| 19140 | 115 aa hypothetical protein | |||
| plasmid pBM153 | ||||
| 19550 | peptide transporter | |||
| 19450 | R | SpsTT3747ORF23395P (96% identity) | PspBM15ORF19460P | |
| 19455 | V | V.Sna24252ORFKP (86% identity) | V.PspBM15ORF19460P | |
| 19460 | M | M.HspM1ORF21145P (90% identity) | M.PspBM15ORF19460P | |
| 19465 | 239 aa hypothetical protein | |||
| 19470 | DNA invertase | |||
| 19475 | M | M.CinP73ORF4804P (97% identity) | M.PspBM15ORF19475P | |
| 19480 | R | Ban10003ORF16420P (64% identity) | PspBM15ORF19475P | |
| 19485 | cation transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pBM151 | ||||
| 18840 | 406 aa hypothetical protein | |||
| 18845 | R | Rba05ORF4740P (95% identity) | PspBM15ORF18850P | |
| 18850 | M | M.Rba05ORF4740P (58% identity) | M.PspBM15ORF18850P | |
| 18855 | phosphoglycerate kinase | |||