Herbivorax saccincola SR1 |
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Putative Herbivorax saccincola SR1 RM systems
Ref: Pechtl,A. et al. unpublished
REBASE ref # 26594
Complete sequence: 3,604,547 bp
GenBank #: CP025197
REBASE acronym: HsaGGR1
Org_num: 26869
All begin HVS_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1575 | SEFIR domain protein | |||
| 1580 | M | M.Ccl19732ORF3625P (99% identity) | M.HsaGGR1ORF1580P | |
| 1585 | 342 aa hypothetical protein | |||
| 1590 | S | S2.MarANOR1ORFBP (33% identity) | S.HsaGGR1ORF1580P | |
| 1595 | R | Ccl19732ORF3625P (99% identity) | HsaGGR1ORF1580P | |
| 1600 | 363 aa hypothetical protein | |||
| 6680 | ATP-dependent DNA helicase RecQ | |||
| 6685 | M | M.Cth5807ORF2840P (99% identity) | M.HsaGGR1ORF6685P | |
| 6690 | S | S.CcuG1I (36% identity) | S.HsaGGR1ORF6685P | |
| 6695 | 302 aa hypothetical protein | |||
| 6700 | R | AthM3ORF5785P (94% identity) | HsaGGR1ORF6685P | |
| 6705 | 65 aa hypothetical protein | |||
| 15145 | Tyrosine recombinase XerD | |||
| 15150 | S | S.Cse106ORF8320P (35% identity) | S.HsaGGR1ORF15155P | |
| 15155 | M | M.TstRKWS1ORF1839P (94% identity) | M.HsaGGR1ORF15155P | |
| 15160 | R | TstRKWS1ORF1839P (99% identity) | HsaGGR1ORF15155P | |
| 15165 | pseudogene | |||
| 16115 | 152 aa hypothetical protein | |||
| 16120 | R | SspNJN17ORF10855P (98% identity) | HsaGGR1ORF16130P | |
| 16125 | S | S.BanV (76% identity) | S.HsaGGR1ORF16130P | |
| 16130 | M | M.DcaSRBORF2301P (99% identity) | M.HsaGGR1ORF16130P | |
| 16135 | C | C.SspNJN17ORF10855P (98% identity) | C.HsaGGR1ORF16130P | |
| 16140 | 764 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2895 | 1184 aa hypothetical protein | |||
| 2900 | RM | DfoDMCORFAP (60% identity) | HsaGGR1ORF2900P | |
| 2905 | PglZ domain protein | |||
| 13460 | 230 aa hypothetical protein | |||
| 13465 | M | M1.Cth20ORF2997P (98% identity) | M1.HsaGGR1ORF13465P | |
| 13470 | M | M2.Cth5807ORF13455P (98% identity) | M2.HsaGGR1ORF13465P | |
| 13475 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13970 | Integrase core domain protein | |||
| 13975 | M | M.DtuL3ORF1116P (99% identity) | M.HsaGGR1ORF13975P | |
| 13980 | R | DtuL3ORF1116P (99% identity) | HsaGGR1ORF13975P | |
| 13985 | Helix-turn-helix domain protein | |||