Ref: Luedin,S.M. et al. unpublished

REBASE ref # 27121

Sequence length:GenBank #:
Chromosome: 6,837,296 bp CP020370
plasmid pTs417: 416,864 bp CP020371
plasmid pTs485: 484,824 bp CP020372

REBASE acronym: Tsy16T

Org_num: 26768

 

All begin THSYN_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
75 tRNA
80 M M.TsyCad16ORFYP (100% identity) M.Tsy16TORF80P
??? S S.TsyCad16ORFYP (99% identity) S.Tsy16TORF80P
90 89 aa hypothetical protein
95 81 aa hypothetical protein
100 95 aa hypothetical protein
105 R TsyCad16ORFYP (100% identity) Tsy16TORF80P
110 263 aa hypothetical protein
 
1015 137 aa hypothetical protein
??? M SAM-dependent DNA methyltransferase M.Tsy16TORFCP
1030 133 aa hypothetical protein
??? S restriction endonuclease subunit S S.Tsy16TORFCP
??? R TsyCad16ORFY1P (100% identity) Tsy16TORFCP
1045 7-carboxy-7-deazaguanine synthase
 
1545 69 aa hypothetical protein
??? S S.TsyCad16ORFXP (100% identity) S.Tsy16TORF1560P
1560 M M.TsyCad16ORFXP (75% identity) M.Tsy16TORF1560P
1565 toxin-antitoxin system toxin component,
 
3250 dihydrofolate reductase
3255 M M.TsyCad16ORFUP (95% identity) M.Tsy16TORF3255P
3260 cell filamentation protein Fic
 
4445 0 aa hypothetical protein
??? R TsyCad16ORFSP (100% identity) Tsy16TORF4455P
4455 M M.TsyCad16ORFSP (100% identity) M.Tsy16TORF4455P
4460 372 aa hypothetical protein
4465 S S.TsyCad16ORFSP (100% identity) S.Tsy16TORF4455P
4470 77 aa hypothetical protein
 
4715 metal-dependent hydrolase
4720 R TsyCad16ORFQP (100% identity) Tsy16TORF4745P
4725 hydroxyacid dehydrogenase
??? S S1.TsyCad16ORFQP (100% identity) S.Tsy16TORF4745P
4740 356 aa hypothetical protein
4745 M M.TsyCad16ORFQP (100% identity) M.Tsy16TORF4745P
4755 ATP-dependent DNA helicase Rep
 
4980 187 aa hypothetical protein
4985 R TsyCad16ORFPP (100% identity) Tsy16TORF5010P
4990 87 aa hypothetical protein
4995 toxin-antitoxin system toxin component,
5000 CopG family transcriptional regulator
??? S S.TsyCad16ORFPP (100% identity) S.Tsy16TORF5010P
??? M M.TsyCad16ORFPP (100% identity) M.Tsy16TORF5010P
5020 ABC transporter permease
 
5515 88 aa hypothetical protein
5520 M M.TsyCad16ORFOP (100% identity) M.Tsy16TORF5520P
5525 74 aa hypothetical protein
5530 nucleotidyltransferase
5535 109 aa hypothetical protein
5540 87 aa hypothetical protein
5545 S S.TsyCad16ORFOP (100% identity) S.Tsy16TORF5520P
5550 167 aa hypothetical protein
5555 385 aa hypothetical protein
5560 R TsyCad16ORFOP (100% identity) Tsy16TORF5520P
5565 TIGR02099 family protein
 
6320 0 aa hypothetical protein
??? M M.TsyCad16ORFMP (100% identity) M.Tsy16TORF6325P
??? R 934 aa hypothetical protein A2512_13285 Tsy16TORF6325P
6335 947 aa hypothetical protein
 
7855 spermidine/putrescine ABC transporter
7860 R TsyCad16ORFKP (100% identity) Tsy16TORF7880P
??? S S.TsyCad16ORFKP (100% identity) S.Tsy16TORF7880P
7870 464 aa hypothetical protein
7875 221 aa hypothetical protein
7880 M M.TsyCad16ORFKP (100% identity) M.Tsy16TORF7880P
7885 1-(5-phosphoribosyl)-5-[(5-
 
8020 68 aa hypothetical protein
8025 R TsyCad16ORFJP (100% identity) Tsy16TORF8025P
8030 145 aa hypothetical protein
 
9710 1487 aa hypothetical protein
9715 M M.TsyCad16ORFHP (100% identity) M.Tsy16TORF9715P
??? S S.TsyCad16ORFHP (100% identity) S.Tsy16TORF9715P
9725 69 aa hypothetical protein
9730 98 aa hypothetical protein
9735 R TsyCad16ORFHP (100% identity) Tsy16TORF9715P
9740 1507 aa hypothetical protein
 
9750 0 aa hypothetical protein
9755 M M.TsyCad16ORFGP (92% identity) M.Tsy16TORF9755P
9760 S S.TsyCad16ORFGP (100% identity) S.Tsy16TORF9755P
9765 218 aa hypothetical protein
9770 Appr-1-p processing protein
9775 R TsyCad16ORFGP (100% identity) Tsy16TORF9755P
9780 zinc metalloprotease
 
11070 metal-dependent hydrolase
??? R TsyCad16ORFQ1P (100% identity) Tsy16TORF11075P
11080 436 aa hypothetical protein
 
14710 323 aa hypothetical protein
14715 M M.TsyCad16ORFO1P (58% identity) M.Tsy16TORF14715P
14720 112 aa hypothetical protein
14725 S S.TsyCad16ORFO1P (100% identity) S.Tsy16TORF14715P
14730 transcriptional regulator
14735 R TsyCad16ORFO1P (100% identity) Tsy16TORF14715P
14740 154 aa hypothetical protein
 
15840 ISAs1 family transposase
??? M M.TsyCad16ORFS1P (100% identity) M.Tsy16TORF15845P
15850 512 aa hypothetical protein
15855 360 aa hypothetical protein
15860 1391 aa hypothetical protein
15865 282 aa hypothetical protein
15870 498 aa hypothetical protein
??? S S.Pbi3152ORF6395P (8% identity) S.Tsy16TORF15845P
15885 76 aa hypothetical protein
 
15955 cell filamentation protein Fic
??? M M.TsyCad16ORFT1P (100% identity) M.Tsy16TORFAP
15965 509 aa hypothetical protein
 
17035 260 aa hypothetical protein
17040 M M.TsyCad16ORFM1P (99% identity) M.Tsy16TORF17040P
17045 S S.TsyCad16ORFM1P (100% identity) S.Tsy16TORF17040P
17050 IS1 family transposase
17055 R TsyCad16ORFM1P (100% identity) Tsy16TORF17040P
17060 163 aa hypothetical protein
 
18250 211 aa hypothetical protein
??? R TsyCad16ORFJ1BP (100% identity) Tsy16TORF18285P
18260 571 aa hypothetical protein
18265 89 aa hypothetical protein
??? S S.TsyCad16ORFJ1P (100% identity) S1.Tsy16TORF18285P
18280 S S2.DspNIV53ORFGP (32% identity) S2.Tsy16TORF18285P
18285 M M.TsyCad16ORFJ1P (100% identity) M.Tsy16TORF18285P
18290 glutaminase
 
20765 metal-dependent hydrolase
20770 R TsyCad16ORFG1P (100% identity) Tsy16TORF20810P
20775 328 aa hypothetical protein
20780 202 aa hypothetical protein
20785 86 aa hypothetical protein
20790 67 aa hypothetical protein
20795 195 aa hypothetical protein
20800 S S.TsyCad16ORFG1P (100% identity) S1.Tsy16TORF20810P
20805 S S1.DbaSRB2ORF3436P (54% identity) S2.Tsy16TORF20810P
??? M M.TsyCad16ORFG1P (100% identity) M.Tsy16TORF20810P
20820 RNA polymerase sigma factor RpoD
 
21270 0 aa hypothetical protein
21275 M M.TsyCad16ORFF1P (100% identity) M.Tsy16TORF21275P
21280 223 aa hypothetical protein
??? S S.TsyCad16ORFF1P (100% identity) S.Tsy16TORF21275P
21290 136 aa hypothetical protein
 
22795 299 aa hypothetical protein
22800 S S.TsyCad16ORFD1P (100% identity) S.Tsy16TORF22805P
??? M M.TsyCad16ORFD1P (100% identity) M.Tsy16TORF22805P
22810 133 aa hypothetical protein
22815 87 aa hypothetical protein
??? R TsyCad16ORFD1P (100% identity) Tsy16TORF22805P
22825 199 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2690 HNH endonuclease
2695 M M.TsyCad16ORFWP (100% identity) M.Tsy16TORF2695P
2700 phosphoribulokinase
 
3385 210 aa hypothetical protein
3390 R Gcy109ORFFP (77% identity) Tsy16TORF3405P
3395 437 aa hypothetical protein
??? M M.TsyCad16ORFTP (100% identity) M.Tsy16TORF3405P
3410 DNA polymerase subunit beta
 
3645 637 aa hypothetical protein
3650 R TsyCad16ORFX1P (100% identity) Tsy16TORF3655P
3655 M M.TsyCad16ORFX1P (100% identity) M.Tsy16TORF3655P
3660 304 aa hypothetical protein
 
4675 245 aa hypothetical protein
4680 RM TsyCad16ORFRP (100% identity) Tsy16TORF4680P
4685 167 aa hypothetical protein
 
10760 136 aa hypothetical protein
??? M M.TsyCad16ORFFP (100% identity) M.Tsy16TORF10765P
10770 stress response serine/threonine protein kinase
 
11575 lytic transglycosylase
??? RM TsyCad16ORFR1P (100% identity) Tsy16TORF11580P
11585 DNA-binding response regulator
 
17560 1083 aa hypothetical protein
??? M M.TsyCad16ORFL1P (100% identity) M.Tsy16TORF17565P
17575 recombinase RecF
 
17930 97 aa hypothetical protein
??? RM TsyCad16ORFK1AP (100% identity) Tsy16TORF17935AP
17940 112 aa hypothetical protein
??? RM TsyCad16ORFK1BP (100% identity) Tsy16TORF17935BP
17955 87 aa hypothetical protein
 
20290 316 aa hypothetical protein
20295 RM TsyCad16ORFH1BP (100% identity) Tsy16TORF20295P
20300 transposase
 
21000 303 aa hypothetical protein
??? M M.TsyCad16ORFV1P (100% identity) M.Tsy16TORF21005P
21010 248 aa hypothetical protein
 
21650 ribonucleotide-diphosphate reductase subunit
??? M M.TsyCad16ORFW1P (100% identity) M.Tsy16TORF21655P
21660 279 aa hypothetical protein
 
22345 addiction module antitoxin RelB
??? RM TsyCad16ORFE1P (100% identity) Tsy16TORF22350P
22355 S49 family peptidase
 
24520 323 aa hypothetical protein
24525 M M.TsyCad16ORFZ1P (100% identity) M.Tsy16TORF24525P
24530 391 aa hypothetical protein
 
24640 biopolymer transporter ExbB
??? M M.TsyCad16ORFC1P (100% identity) M.Tsy16TORF24645P
24650 124 aa hypothetical protein
 
24670 133 aa hypothetical protein
24675 RM TsyCad16ORFB1P (100% identity) Tsy16TORF24675P
24680 489 aa hypothetical protein
 
25635 89 aa hypothetical protein
25640 M M.TsyCad16ORFA1P (100% identity) M.Tsy16TORF25640P
25645 321 aa hypothetical protein
 
26800 89 aa hypothetical protein
??? M M.TsyCad16ORFZP (100% identity) M.Tsy16TORF26805P
26810 helicase
 
27065 restriction endonuclease
??? M M.TsyCad16ORFC2P (100% identity) M.Tsy16TORF27070P
27075 1031 aa hypothetical protein
 
28645 DNA protecting protein DprA
28650 M M.TsyCad16ORFB2P (100% identity) M.Tsy16TORF28650P
28655 V V.PspSCB32ORFAP (54% identity) V.Tsy16TORF28650P
28660 447 aa hypothetical protein
 
28900 short-chain dehydrogenase
28905 C C.TsyCad16ORFA2P (100% identity) C.Tsy16TORF28915P
??? R TsyCad16ORFA2P (100% identity) Tsy16TORF28915P
28915 M M.TsyCad16ORFA2P (100% identity) M.Tsy16TORF28915P
28920 excinuclease ABC subunit A
 
plasmid pTs417
 
30575 86 aa hypothetical protein
30580 RM TsyCad16ORFABP (100% identity) Tsy16TORF30580AP
30585 95 aa hypothetical protein
30590 RM TsyCad16ORFAAP (100% identity) Tsy16TORF30580BP
30595 MazF family transcriptional regulator
 
plasmid pTs485
 
32520 91 aa hypothetical protein
??? M M.TsyCad16ORFDP (100% identity) M.Tsy16TORF32525P
32530 202 aa hypothetical protein
 
32965 ISAs1 family transposase
??? RM TsyCad16ORFBP (96% identity) Tsy16TORFBP
32975 131 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
5960 sulfur globule protein CV1
5965 R TsyCad16ORFNP (100% identity) Tsy16TORF5970P
5970 M M.TsyCad16ORFNP (100% identity) M.Tsy16TORF5970P
5975 21 aa hypothetical protein
 
7625 404 aa hypothetical protein
7630 R TsyCad16ORFLP (100% identity) Tsy16TORF7635P
7635 M M.TsyCad16ORFLP (100% identity) M.Tsy16TORF7635P
7640 37 aa hypothetical protein
 
18400 chromosome segregation protein SMC
18405 M M.TsyCad16ORFI1P (100% identity) M.Tsy16TORF18405P
18410 twitching motility protein PilT
18415 93 aa hypothetical protein
18420 R TsyCad16ORFI1P (92% identity) Tsy16TORF18405P
18425 383 aa hypothetical protein
 
plasmid pTs485
 
31515 395 aa hypothetical protein
31520 R TsyCad16ORFEP (100% identity) Tsy16TORF31530P
31525 hydroxyacid dehydrogenase
31530 M M.TsyCad16ORFEP (100% identity) M.Tsy16TORF31530P
31535 GNAT family N-acetyltransferase
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
10535 463 aa hypothetical protein
??? R TsyCad16McrBP (100% identity) Tsy16TMcrBP
10545 R 428 aa hypothetical protein Tsy16TMcrCP
10550 525 aa hypothetical protein