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Putative Nostoc flagelliforme CCNUN1 RM systems
Ref: Shang,J. unpublished
REBASE ref # 25431
Sequence length: | GenBank #: | |
Chromosome: | 8,363,872 bp | CP024785 |
plasmid pNFSY05: | 152,318 bp | CP024790 |
plasmid pNFSY06: | 239,322 bp | CP024791 |
plasmid pNFSY08: | 805,120 bp | CP024793 |
REBASE acronym: NflNUN1
Org_num: 26737
All begin COO91_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2826 | TniQ | |||
2827 | M | M1.Nsp926ORF2620P (64% identity) | M.NflNUN1ORF2827P | |
2828 | R | Nsp926ORF2620P (75% identity) | NflNUN1ORF2827P | |
2829 | CopG-like ribbon-helix-helix domain | |||
6557 | Site-specific DNA recombinase related to the DNA | |||
6558 | M | Type I restriction-modification system, DNA | M.NflNUN1ORF6558P | |
6559 | S | S.HheCN1ORF36840P (37% identity) | S.NflNUN1ORF6558P | |
6560 | R | Cbr22ORF12500P (79% identity) | NflNUN1ORF6558P | |
6561 | 50 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
703 | 37 aa hypothetical protein | |||
704 | C | C.Ncf36ORF60140P (95% identity) | C.NflNUN1ORF706P | |
705 | R | Nsp5183ORF5160P (93% identity) | NflNUN1ORF706P | |
706 | M | M.Ncf36ORF60140P (93% identity) | M.NflNUN1ORF706P | |
707 | 129 aa hypothetical protein | |||
729 | 79 aa hypothetical protein | |||
??? | RM | Tsp7712ORF29570P (50% identity) | NflNUN1ORF730P | |
732 | Type II restriction/modification system, DNA | |||
1298 | Transposase, IS1 family | |||
1299 | M | M.NspN6ORF4779P (47% identity) | M.NflNUN1ORF1299P | |
1300 | Site-specific DNA-cytosine methylase | |||
2222 | 45 aa hypothetical protein | |||
2223 | M | M.NcoHK02ORF13060P (98% identity) | M.NflNUN1ORF2223P | |
2224 | pseudogene | |||
2918 | 4-amino-4-deoxy-L-arabinose transferase or | |||
2919 | M | M.NcoHK02ORF360P (82% identity) | M.NflNUN1ORF2919P | |
??? | R | restriction endonuclease | NflNUN1ORF2919P | |
2923 | clpC, ATP-dependent Clp protease ATP-binding | |||
3906 | lpxB, lipid-A-disaccharide synthase | |||
3907 | M | M.NcoHK02ORF24620P (88% identity) | M.NflNUN1ORF3907P | |
3908 | oxidoreductase | |||
4596 | 55 aa hypothetical protein | |||
4597 | M | M.Nsp926ORF23400P (96% identity) | M.NflNUN1ORF4597P | |
4598 | pseudogene | |||
5124 | Signal transduction histidine kinase | |||
5125 | R | Fsp4106ORF40900P (83% identity) | NflNUN1ORF5126P | |
5126 | M | M.Nsp5183ORF1824P (89% identity) | M.NflNUN1ORF5126P | |
5127 | DNA-binding transcriptional regulator | |||
6455 | SAM-dependent methyltransferase | |||
6456 | M | M.Nsp53789DndEP (87% identity) | M.NflNUN1DndEP | |
6457 | dndD, DNA sulfur modification protein DndD | |||
6456 | dndE, DNA sulfur modification protein DndE | |||
6457 | M | M.NspC052DndDP (95% identity) | M.NflNUN1DndDP | |
6458 | dndC, DNA sulfur modification protein DndC | |||
6457 | dndD, DNA sulfur modification protein DndD | |||
6458 | M | M.NspC057DndCP (96% identity) | M.NflNUN1DndCP | |
6459 | DndB-like protein | |||
6634 | deoC, deoxyribose-phosphate aldolase | |||
6635 | M | M.NcoHK02ORF32090P (91% identity) | M.NflNUN1ORF6635P | |
6636 | wcaI, colanic acid biosynthesis glycosyl | |||
7032 | Site-specific DNA-adenine methylase | |||
7033 | M | M.Ncf36ORF43400P (92% identity) | M.NflNUN1ORF7033P | |
7034 | Expressed protein involved in photorespiration | |||
7145 | 208 aa hypothetical protein | |||
7146 | M | M.NcoHK02ORF5690P (95% identity) | M.NflNUN1ORF7146P | |
7147 | R | Nsp53789ORF28945P (75% identity) | NflNUN1ORF7146P | |
7148 | cytochrome, transmembrane | |||
8059 | Transposase | |||
8060 | RM | Ccy595ORF19630P (25% identity) | NflNUN1ORF8060P | |
8061 | 181 aa hypothetical protein | |||
8096 | SRSO17 transposase | |||
8097 | R | Csp7103ORFRP (64% identity) | NflNUN1ORF8097P | |
8098 | DNA modification methylase | |||
8097 | restriction endonuclease R.SthI | |||
8098 | M | M.PspETS05ORFHP (70% identity) | M.NflNUN1ORF8098P | |
8099 | Site-specific DNA-cytosine methylase | |||
8206 | 43 aa hypothetical protein | |||
8207 | M | M.NflNUN1ORF9706P (83% identity) | M.NflNUN1ORF8207P | |
8208 | PUA-like domain | |||
8377 | ATP-binding protein involved in | |||
??? | RM | Nsp926ORF33315P (70% identity) | NflNUN1ORF8378P | |
8381 | 80 aa hypothetical protein | |||
plasmid pNFSY05 | ||||
9493 | Methyl-accepting chemotaxis protein | |||
9494 | M | M.Ncf36ORF64590P (94% identity) | M.NflNUN1ORF9494P | |
9495 | R | Ncf36ORF64590P (95% identity) | NflNUN1ORF9494P | |
9496 | Methyl-accepting chemotaxis protein | |||
9642 | Protein of unknown function DUF1392 | |||
9643 | M | M.NspN6ORF2172P (84% identity) | M.NflNUN1ORF9643P | |
9644 | PUA-like domain | |||
plasmid pNFSY06 | ||||
9705 | PUA-like domain | |||
9706 | M | M.NspN6ORF2376P (88% identity) | M.NflNUN1ORF9706P | |
9707 | Protein of unknown function DUF1392 | |||
9822 | 59 aa hypothetical protein | |||
9823 | M | M.NspC052ORF32930P (73% identity) | M.NflNUN1ORF9823P | |
9824 | Protein of unknown function DUF1392 | |||
plasmid pNFSY08 | ||||
10345 | 47 aa hypothetical protein | |||
??? | M | M.NspN6ORF2172P (27% identity) | M.NflNUN1ORF10346BP | |
??? | M | M.NspNUC1ORF8696P (60% identity) | M.NflNUN1ORF10346AP | |
10348 | PUA-like domain | |||
10403 | dnaB, replicative DNA helicase | |||
10404 | M | M.NflNUN1ORF10602P (65% identity) | M.NflNUN1ORF10404P | |
10405 | 63 aa hypothetical protein | |||
10601 | DNA replication protein DnaD | |||
10602 | M | M.NcoHK02ORF64020P (72% identity) | M.NflNUN1ORF10602P | |
10603 | Protein of unknown function DUF1392 | |||
10706 | RM | Nsp0702ORF17670P (65% identity) | NflNUN1ORF10706P | |
10708 | Superfamily II DNA or RNA helicase, SNF2 family | |||
10747 | Protein of unknown function DUF1392 | |||
10748 | M | M.NcoHK02ORF71140P (73% identity) | M.NflNUN1ORF10748P | |
10749 | DNA-binding domain | |||
10810 | PUA-like domain | |||
10811 | M | M.NspC057ORF32660P (58% identity) | M.NflNUN1ORF10811P | |
10813 | Site-specific DNA-cytosine methylase |