Ref: Shang,J. unpublished

REBASE ref # 25431

Sequence length:GenBank #:
Chromosome: 8,363,872 bp CP024785
plasmid pNFSY05: 152,318 bp CP024790
plasmid pNFSY06: 239,322 bp CP024791
plasmid pNFSY08: 805,120 bp CP024793

REBASE acronym: NflNUN1

Org_num: 26737

 

All begin COO91_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2826 TniQ
2827 M hsdM, type I restriction enzyme M protein M.NflNUN1ORF2827P
2828 R Tca511288ORF29070P (39% identity) NflNUN1ORF2827P
2829 CopG-like ribbon-helix-helix domain
 
6557 Site-specific DNA recombinase related to the DNA
6558 M Type I restriction-modification system, DNA M.NflNUN1ORF6558P
6559 S S.PknB092ORF17725P (40% identity) S.NflNUN1ORF6558P
6560 R Cbr22ORF12500P (79% identity) NflNUN1ORF6558P
6561 50 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
703 37 aa hypothetical protein
704 C C.Ncf36ORF60140P (95% identity) C.NflNUN1ORF706P
705 R Nsp5183ORF5160P (93% identity) NflNUN1ORF706P
706 M M.Ncf36ORF60140P (94% identity) M.NflNUN1ORF706P
707 129 aa hypothetical protein
 
729 79 aa hypothetical protein
??? RM Tsp7601ORF1716P (50% identity) NflNUN1ORF730P
732 Type II restriction/modification system, DNA
 
1298 Transposase, IS1 family
1299 M M.NspN6ORF4779P (47% identity) M.NflNUN1ORF1299P
1300 Site-specific DNA-cytosine methylase
 
2222 45 aa hypothetical protein
2223 M M.NcoHK02ORF13060P (98% identity) M.NflNUN1ORF2223P
2224 pseudogene
 
2918 4-amino-4-deoxy-L-arabinose transferase or
2919 M M.NcoHK02ORF360P (82% identity) M.NflNUN1ORF2919P
??? R restriction endonuclease NflNUN1ORF2919P
2923 clpC, ATP-dependent Clp protease ATP-binding
 
3906 lpxB, lipid-A-disaccharide synthase
3907 M M.NcoHK02ORF24620P (88% identity) M.NflNUN1ORF3907P
3908 oxidoreductase
 
4596 55 aa hypothetical protein
4597 M M.NcoHK02ORF39950P (96% identity) M.NflNUN1ORF4597P
4598 pseudogene
 
5124 Signal transduction histidine kinase
5125 R Fsp4106ORF40900P (83% identity) NflNUN1ORF5126P
5126 M M.Nsp5183ORF1824P (89% identity) M.NflNUN1ORF5126P
5127 DNA-binding transcriptional regulator
 
6455 SAM-dependent methyltransferase
6456 M M.Nsp53789DndEP (87% identity) M.NflNUN1DndEP
6457 dndD, DNA sulfur modification protein DndD
 
6456 dndE, DNA sulfur modification protein DndE
6457 M M.NspC052DndDP (95% identity) M.NflNUN1DndDP
6458 dndC, DNA sulfur modification protein DndC
 
6457 dndD, DNA sulfur modification protein DndD
6458 M M.NspC057DndCP (96% identity) M.NflNUN1DndCP
6459 DndB-like protein
 
6634 deoC, deoxyribose-phosphate aldolase
6635 M M.NcoHK02ORF32090P (91% identity) M.NflNUN1ORF6635P
6636 wcaI, colanic acid biosynthesis glycosyl
 
7032 Site-specific DNA-adenine methylase
7033 M M.Ncf36ORF43400P (92% identity) M.NflNUN1ORF7033P
7034 Expressed protein involved in photorespiration
 
7145 208 aa hypothetical protein
7146 M M.NcoHK02ORF5690P (95% identity) M.NflNUN1ORF7146P
7147 R Nsp53789ORF28945P (75% identity) NflNUN1ORF7146P
7148 cytochrome, transmembrane
 
8059 Transposase
8060 RM Ccy595ORF19630P (25% identity) NflNUN1ORF8060P
8061 181 aa hypothetical protein
 
8096 SRSO17 transposase
8097 R Csp7103ORFRP (64% identity) NflNUN1ORF8097P
8098 DNA modification methylase
 
8097 restriction endonuclease R.SthI
8098 M M.PspETS05ORFHP (70% identity) M.NflNUN1ORF8098P
8099 Site-specific DNA-cytosine methylase
 
8206 43 aa hypothetical protein
8207 M M.NflNUN1ORF9706P (83% identity) M.NflNUN1ORF8207P
8208 PUA-like domain
 
8377 ATP-binding protein involved in
??? RM Nca389ORF30620P (66% identity) NflNUN1ORF8378P
8381 80 aa hypothetical protein
 
plasmid pNFSY05
 
9493 Methyl-accepting chemotaxis protein
9494 M M.Ncf36ORF64590P (94% identity) M.NflNUN1ORF9494P
9495 R Ncf36ORF64590P (95% identity) NflNUN1ORF9494P
9496 Methyl-accepting chemotaxis protein
 
9642 Protein of unknown function DUF1392
9643 M M.NspN6ORF2172P (84% identity) M.NflNUN1ORF9643P
9644 PUA-like domain
 
plasmid pNFSY06
 
9705 PUA-like domain
9706 M M.NspN6ORF2376P (88% identity) M.NflNUN1ORF9706P
9707 Protein of unknown function DUF1392
 
9822 59 aa hypothetical protein
9823 M M.NspC052ORF32930P (73% identity) M.NflNUN1ORF9823P
9824 Protein of unknown function DUF1392
 
plasmid pNFSY08
 
10345 47 aa hypothetical protein
??? M M.NspN6ORF2172P (27% identity) M.NflNUN1ORF10346BP
??? M M.NspNUC1ORF8696P (60% identity) M.NflNUN1ORF10346AP
10348 PUA-like domain
 
10403 dnaB, replicative DNA helicase
10404 M M.NflNUN1ORF10602P (65% identity) M.NflNUN1ORF10404P
10405 63 aa hypothetical protein
 
10601 DNA replication protein DnaD
10602 M M.NcoHK02ORF64020P (72% identity) M.NflNUN1ORF10602P
10603 Protein of unknown function DUF1392
 
10706 RM Nsp0702ORF17670P (66% identity) NflNUN1ORF10706P
10708 Superfamily II DNA or RNA helicase, SNF2 family
 
10747 Protein of unknown function DUF1392
10748 M M.NcoHK02ORF71140P (73% identity) M.NflNUN1ORF10748P
10749 DNA-binding domain
 
10810 PUA-like domain
10811 M M.NspC057ORF32660P (58% identity) M.NflNUN1ORF10811P
10813 Site-specific DNA-cytosine methylase