Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 |
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Putative Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 RM systems
Ref: Falentin,H. et al. unpublished
REBASE ref # 23848
Complete sequence: 2,616,384 bp
GenBank #: FN806773 (NC_014215)
REBASE acronym: PfrC
Org_num: 6046
All begin PFREUD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | DNA polymerase | |||
| 1230 | R | PfrUF1ORF10885P (100% identity) | PfrCORF1260P | |
| ??? | S | S1.PfrJS15aORF135P (100% identity) | S.PfrCORF1260P | |
| 1260 | M | M.PfrUF1ORF10885P (100% identity) | M.PfrCORF1260P | |
| 1270 | ABC transporter, ATP-binding protein | |||
| 21370 | 63 aa Hypothetical protein | |||
| 21380 | M | Type I restriction-modification system DNA | M.PfrCORF21380P | |
| 21390 | DNA methylase ( site-specific | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24380 | Transposase | |||
| 1180 | R | PfrJS15aORF126P (100% identity) | C | PfrCI |
| 1190 | 68 aa Hypothetical protein | |||
| 24380 | Transposase | |||
| 1180 | R | PfrJS15aORF126P (100% identity) | PfrCORF1180P | |
| 1190 | 68 aa Hypothetical protein | |||
| 2760 | 703 aa Hypothetical protein | |||
| 2770 | M | M.PfrPBF12ORFCP (100% identity) | M.PfrCORF2770P | |
| 2780 | Carbohydrate kinase, PfkB | |||
| 24550 | Transposase | |||
| 2950 | RM | PfrUF1II (100% identity) | PfrCORF2950P | |
| 2960 | 159 aa Hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21380 | Type I restriction-modification system DNA | |||
| 21390 | M | M.PfrUF1I (100% identity) | M.PfrCORF21390P | |
| 21400 | R | PfrUF1IP (100% identity) | PfrCORF21390P | |
| 21410 | 211 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3190 | Multi antimicrobial extrusion protein MatE | |||
| 3200 | R | PfrUF1Mrr2P (100% identity) | PfrCMrrP | |
| 3210 | 297 aa Hypothetical protein | |||
| 3550 | 99 aa Hypothetical protein | |||
| 3560 | R | PfrJS15ORF358P (100% identity) | PfrCORF3560P | |
| 3570 | Anaerobic C4-dicarboxylate transporter | |||