Escherichia coli AMA1167 |
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Putative Escherichia coli AMA1167 RM systems
Ref: Overballe-Petersen,S. et al. unpublished
REBASE ref # 26572
| Sequence length: | GenBank #: | |
| Chromosome: | 4,767,526 bp | CP024801 |
| plasmid pAMA1167-NDM-5: | 111,310 bp | CP024805 |
REBASE acronym: Eco1167
Org_num: 26679
All begin CUC42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6145 | IS1 family transposase | |||
| 6150 | R | Sen12509ORF5865P (100% identity) | Eco1167ORF6160P | |
| 6155 | S | S.Sen12509ORF5865P (100% identity) | S.Eco1167ORF6160P | |
| 6160 | M | M.SenS688ORF13495P (100% identity) | M.Eco1167ORF6160P | |
| 6165 | IS3 family transposase | |||
| 14530 | transcription factor | |||
| 14535 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco1167ORF14535P |
| 14540 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco1167ORF14535P |
| 14545 | DUF4433 domain-containing protein | |||
| 14550 | Appr-1-p processing protein | |||
| 14555 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco1167ORF14535P |
| 14560 | M48 family peptidase | |||
| plasmid pAMA1167-NDM-5 | ||||
| 25200 | glycosyltransferase | |||
| 25205 | R | EcosR11ORF25685P (100% identity) | RAACNNNNNNTGAR | Eco1167ORF25215P |
| 25210 | S | S.SenceORFJP (100% identity) | RAACNNNNNNTGAR | S.Eco1167ORF25215P |
| ??? | M | M.Ecos2020ORFGP (100% identity) | RAACNNNNNNTGAR | M.Eco1167ORF25215P |
| 25220 | type II toxin-antitoxin system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2120 | protein DamX | |||
| 2125 | M | DNA adenine methylase | GATC | M.Eco1167DamP |
| 2130 | ribulose-phosphate 3-epimerase | |||
| 2780 | DUF2556 domain-containing protein | |||
| 2785 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco1167ORF2785P |
| 2790 | Fis family transcriptional regulator | |||
| 9575 | phosphohydrolase | |||
| 9580 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1167DcmP |
| 9585 | V | V.SsoSE61DcmP (100% identity) | V.Eco1167DcmP | |
| 9590 | EamA family transporter | |||
| 23315 | 345 aa hypothetical protein | |||
| 23320 | M | M.EcosE2ORF21575P (100% identity) | M.Eco1167ORF23320P | |
| 23325 | 68 aa hypothetical protein | |||
| plasmid pAMA1167-NDM-5 | ||||
| 25085 | 73 aa hypothetical protein | |||
| 25090 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco1167ORF25090P |
| 25095 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13790 | isocitrate dehydrogenase | |||
| 13795 | R | EcosEC27McrCP (100% identity) | Eco1167McrCP | |
| 13800 | R | EcoteDMcrBP (100% identity) | Eco1167McrBP | |
| 13805 | DNA-invertase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15825 | replication endonuclease | |||
| 15830 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco1167ORF15830P |
| 15835 | 75 aa hypothetical protein | |||