Rhodobaca barguzinensis alga05 |
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Putative Rhodobaca barguzinensis alga05 RM systems
Ref: Kopejtka,K. et al. unpublished
REBASE ref # 25401
Complete sequence: 3,899,419 bp
GenBank #: CP024899
REBASE acronym: Rba05
Org_num: 26664
All begin BG454_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5200 | 90 aa hypothetical protein | |||
| 5205 | M | M.Telox9ORF10030P (81% identity) | TGGANNNNNNNTTC | M.Rba05I |
| 5210 | S | S.SpoN02ORF15765P (48% identity) | TGGANNNNNNNTTC | S.Rba05I |
| 5215 | R | RbeTP66ORF1375P (60% identity) | TGGANNNNNNNTTC | Rba05IP |
| 5220 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 925 | 227 aa hypothetical protein | |||
| 930 | M | M.RbaLa6ORF6435P (76% identity) | M.Rba05ORF930P | |
| 935 | V | V.PspBM15ORF6820P (60% identity) | V.Rba05ORF930P | |
| 940 | R | Ppa10489ORF18685P (75% identity) | Rba05ORF930P | |
| 945 | DNA cytosine methyltransferase | |||
| 940 | type II restriction endonuclease | |||
| 945 | M | M.Psp3301ORFEP (66% identity) | M.Rba05ORF945P | |
| 950 | 334 aa hypothetical protein | |||
| 965 | IS5/IS1182 family transposase | |||
| 970 | M | M1.RspAB25ORF20900P (94% identity) | M1.Rba05ORF970P | |
| 975 | M | M1.Rba05ORF6635P (88% identity) | M2.Rba05ORF970P | |
| 980 | 169 aa hypothetical protein | |||
| 3760 | 167 aa hypothetical protein | |||
| 3765 | M | M.PspSC26ORF4110P (83% identity) | M.Rba05ORF3765P | |
| 3770 | V | V.Gspcon5ORF7670P (60% identity) | V.Rba05ORF3765P | |
| 3775 | 542 aa hypothetical protein | |||
| 3930 | ribonuclease HII | |||
| 3935 | M | M.HspM1ORF14005P (94% identity) | GANTC | M.Rba05II |
| 3940 | carboxymuconolactone decarboxylase family | |||
| 6415 | PIN domain-containing protein | |||
| 6420 | RM | PmaS1ORF19310P (79% identity) | Rba05ORF6420P | |
| 6425 | 161 aa hypothetical protein | |||
| 6630 | 71 aa hypothetical protein | |||
| 6635 | M | M2.RspKDORF4067P (89% identity) | M1.Rba05ORF6635P | |
| ??? | M | M2.RspA2ORFC1P (79% identity) | M2.Rba05ORF6635P | |
| 6645 | 72 aa hypothetical protein | |||
| 6655 | 219 aa hypothetical protein | |||
| 6660 | M | M.RspA2ORFE1P (70% identity) | M.Rba05ORF6660P | |
| 6665 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4735 | DUF1738 domain-containing protein | |||
| 4740 | M | M.PspBM15ORF18850P (58% identity) | M.Rba05ORF4740P | |
| 4745 | R | PspBM15ORF18850P (95% identity) | Rba05ORF4740P | |
| 4750 | 171 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6445 | DUF4236 domain-containing protein | |||
| ??? | R | RsaMcrBP (41% identity) | Rba05McrBP | |
| 6455 | R | RsaMcrCP (76% identity) | Rba05McrCP | |
| 6460 | 133 aa hypothetical protein | |||