Escherichia coli AR_0015 |
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Putative Escherichia coli AR_0015 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,107,874 bp | CP024862 |
| plasmid unitig_1_pilon: | 139,059 bp | CP024863 |
| plasmid unitig_2_pilon: | 88,768 bp | CP024864 |
| plasmid unitig_3_pilon: | 48,511 bp | CP024865 |
REBASE acronym: Eco0015
Org_num: 26013
All begin AM342_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16675 | endoribonuclease SymE | |||
| 16680 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco0015ORF16685P |
| 16685 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco0015ORF16685P |
| 16690 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco0015ORF16685P |
| 16695 | restriction endonuclease | |||
| plasmid unitig_1_pilon | ||||
| 26665 | glycosyl transferase | |||
| 26670 | R | EcosR11ORF25685P (100% identity) | Eco0015ORF26680P | |
| 26675 | S | S.SenceORFJP (100% identity) | S.Eco0015ORF26680P | |
| ??? | M | M.Ecos2020ORFGP (100% identity) | M.Eco0015ORF26680P | |
| 26685 | type II toxin-antitoxin system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2545 | drug/metabolite exporter YedA | |||
| 2550 | V | V.SflSTLE3DcmP (100% identity) | V.Eco0015DcmP | |
| 2555 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco0015DcmP |
| 2560 | HD domain-containing protein | |||
| 3560 | 330 aa hypothetical protein | |||
| 3565 | M | M.Sbo812ORFEP (100% identity) | M.Eco0015ORF3565P | |
| 3570 | replication protein A | |||
| 7965 | integrase | |||
| 7970 | R | SflFF24DptFP (100% identity) | Eco0015DptFP | |
| 7975 | DNA phosphorothioation-dependent restriction | |||
| 7970 | DNA phosphorothioation-dependent restriction | |||
| 7975 | R | SflFF24DptGP (100% identity) | Eco0015DptGP | |
| 7980 | DNA phosphorothioation-dependent restriction | |||
| 7975 | DNA phosphorothioation-dependent restriction | |||
| 7980 | R | EcotcmA3DptHP (100% identity) | Eco0015DptHP | |
| 7985 | 113 aa hypothetical protein | |||
| 7995 | DGQHR domain-containing protein | |||
| 8000 | M | M.SflFF24DndEP (100% identity) | M.Eco0015DndEP | |
| 8005 | DNA sulfur modification protein DndD | |||
| 8000 | DUF1832 domain-containing protein | |||
| 8005 | M | M.SflFF24DndDP (100% identity) | M.Eco0015DndDP | |
| 8010 | DNA phosphorothioation system sulfurtransferase | |||
| 8005 | DNA sulfur modification protein DndD | |||
| 8010 | M | M.SflFF24DndCP (100% identity) | M.Eco0015DndCP | |
| 8015 | DNA sulfur modification protein DndB | |||
| 8010 | DNA phosphorothioation system sulfurtransferase | |||
| 8015 | M | M.SflFF24DndBP (100% identity) | M.Eco0015DndBP | |
| 8020 | osmoprotectant transport activator ProQ | |||
| 9810 | Fis family transcriptional regulator | |||
| 9815 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco0015ORF9815P |
| 9820 | transporter | |||
| 10375 | ribulose-phosphate 3-epimerase | |||
| 10380 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0015DamP |
| 10385 | cell division protein DamX | |||
| plasmid unitig_1_pilon | ||||
| 26550 | 73 aa hypothetical protein | |||
| 26555 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco0015ORF26555P |
| 26560 | 0 aa hypothetical protein | |||
| plasmid unitig_2_pilon | ||||
| 27565 | 0 aa hypothetical protein | |||
| 27570 | M | M.EcoR29ORF15010P (99% identity) | M.Eco0015ORF27570P | |
| 27575 | 73 aa hypothetical protein | |||
| plasmid unitig_3_pilon | ||||
| 27910 | 89 aa hypothetical protein | |||
| 27915 | M | M.Eco2E3C03ORF25705P (99% identity) | M.Eco0015ORF27915P | |
| 27925 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16690 | type I restriction-modification system | |||
| 16695 | R | EcosS1MrrP (100% identity) | Eco0015MrrP | |
| 16700 | GTPase | |||