Ref: Lucas,S. et al. unpublished

REBASE ref # 14292

Complete sequence: 3,260,398 bp

GenBank #: CP002049 (NC_014221)

REBASE acronym: TraRQ

Org_num: 6055

 

All begin Trad_

Type II
ORF Gene Most similar Specificity Name
 
115 D-isomer specific 2-hydroxyacid dehydrogenase
116 RM 300 aa hypothetical protein TraRQORF116P
117 60 aa conserved hypothetical protein
 
118 176 aa conserved hypothetical protein
119 RM M2.DspRLORF11080P (78% identity) TraRQORF119P
120 Aldehyde Dehydrogenase
 
636 182 aa hypothetical protein
637 M M.PbaPan44ORF19100P (45% identity) CTCGAG M.TraRQORF637P
638 ABC transporter related protein
 
1008 permease YjgP/YjgQ family protein
1009 M M.AavRS1ORFGP (50% identity) CTCGAG M.TraRQORF1009P
1010 R SbrRU1ORF784P (41% identity) CTCGAG TraRQORF1009P
1011 (p)ppGpp synthetase I, SpoT/RelA
 
1192 protein of unknown function DUF499
??? M M.Mae2481ORF3791P (20% identity) M.TraRQORF1193AP
1194 transposase IS200-family protein
??? M M.RspENV425ORF2675P (39% identity) M.TraRQORF1193BP
1195 Nucleotide-binding protein, PIN domain protein
 
2710 129 aa hypothetical protein
2711 R CthsBORF10035P (40% identity) TraRQORF2714P
2712 prevent-host-death family protein
2713 PilT protein domain protein
2714 M M.Ned1411ORF33845P (29% identity) M.TraRQORF2714P
2715 79 aa conserved hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
1507 amidase, hydantoinase/carbamoylase family
1508 R NhaNc4McrBP (22% identity) TraRQMcrBP
1509 Bile acid:sodium symporter