Prevotella intermedia KCOM 2033 |
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Putative Prevotella intermedia KCOM 2033 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Complete sequence: 2,777,805 bp
GenBank #: CP024696
REBASE acronym: Pin2033
Org_num: 26575
All begin CTM50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4610 | fibronectin-binding protein (FBP) | |||
| 4615 | R | Pin2833ORF9850P (99% identity) | Pin2033ORF4630P | |
| 4620 | S | S2.Pin2833ORF9850P (99% identity) | S1.Pin2033ORF4630P | |
| 4625 | S | S1.Pin2833ORF9850P (100% identity) | S2.Pin2033ORF4630P | |
| 4630 | M | M.Pin2833ORF9850P (99% identity) | M.Pin2033ORF4630P | |
| 4635 | XRE family transcriptional regulator | |||
| 9725 | glycine cleavage system H protein | |||
| 9730 | C | C.Pin1779ORF180P (100% identity) | C.Pin2033ORF9730P | |
| 9735 | M48 family peptidase | |||
| 9735 | M48 family peptidase | |||
| 9740 | R | Tfo10960ORF5495P (99% identity) | Pin2033ORF9745P | |
| 9745 | M | M.TfoUB4ORF338P (98% identity) | M.Pin2033ORF9745P | |
| 9750 | 339 aa hypothetical protein | |||
| 9755 | S | S.Pin17FIV (66% identity) | S.Pin2033ORF9745P | |
| 9760 | 0 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | SNF2/RAD54 family helicase | |||
| 2140 | RM | Pin1101ORFDP (87% identity) | Pin2033ORF2140P | |
| 2145 | 171 aa hypothetical protein | |||
| 3195 | R | PinZORFHP (87% identity) | GGATG | Pin2033IIP |
| 3200 | M | M1.Pin25611ORFFP (99% identity) | GGATG | M1.Pin2033II |
| 3205 | M | M2.PinZORFHP (90% identity) | GGATG | M2.Pin2033II |
| 3210 | DUF4295 domain-containing protein | |||
| 4005 | 0 aa hypothetical protein | |||
| 4010 | M | M.Pin1779ORF10010P (99% identity) | M.Pin2033ORF4010P | |
| 4015 | R | Pin1779ORF10010P (99% identity) | Pin2033ORF4010P | |
| 4020 | IS30 family transposase | |||
| 5695 | 293 aa hypothetical protein | |||
| 5700 | R | PinZORFBP (99% identity) | GATC | Pin2033IP |
| 5705 | M | M.PinZORFBP (98% identity) | GATC | M.Pin2033I |
| 5710 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1860 | polyketide cyclase | |||
| 1865 | R | Pni103McrCP (96% identity) | Pin2033McrCP | |
| 1870 | R | Pin2836McrBP (97% identity) | Pin2033McrBP | |
| 1875 | 0 aa hypothetical protein | |||