Prevotella intermedia KCOM 1949 |
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Putative Prevotella intermedia KCOM 1949 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,011,558 bp | CP024727 |
| chromosome 2: | 753,182 bp | CP024728 |
REBASE acronym: Pin1949
Org_num: 26583
All begin CTM46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 9180 | nicotinamidase | |||
| 9185 | M | M.Pin1653I (98% identity) | M.Pin1949ORF9185P | |
| 9190 | S | S.Pin1653I (59% identity) | S.Pin1949ORF9185P | |
| 9195 | R | Pin1945IIP (99% identity) | Pin1949ORF9185P | |
| 9200 | zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1635 | polyketide cyclase | |||
| 1640 | M | M.Pin1945ORF600P (100% identity) | M.Pin1949ORF1640P | |
| 1645 | R | Pin1945ORF600P (99% identity) | Pin1949ORF1640P | |
| 1650 | DUF4294 domain-containing protein | |||
| 5000 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| 5005 | M | M.Pin1945I (100% identity) | GATC | M.Pin1949I |
| 5010 | R | Pin1945IP (100% identity) | GATC | Pin1949IP |
| 5015 | 293 aa hypothetical protein | |||
| chromosome 2 | ||||
| 12080 | ATP-dependent helicase | |||
| 12085 | RM | Pin1945ORF13050P (100% identity) | Pin1949ORF12085P | |
| 12090 | 342 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2400 | XRE family transcriptional regulator | |||
| 2405 | R | Pin1945ORF8655P (99% identity) | Pin1949ORF2410P | |
| ??? | M | M.Pin1945ORF8655P (99% identity) | M.Pin1949ORF2410P | |
| 2420 | 453 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 9595 | 65 aa hypothetical protein | |||
| 9600 | R | Pin2069McrBP (98% identity) | Pin1949McrBP | |
| 9605 | R | Pin2837McrCP (97% identity) | Pin1949McrCP | |
| 9610 | polyketide cyclase | |||