Prevotella intermedia KCOM 2837 |
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Putative Prevotella intermedia KCOM 2837 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,064,201 bp | CP024723 |
| chromosome 2: | 825,849 bp | CP024724 |
REBASE acronym: Pin2837
Org_num: 26581
All begin CTM62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2920 | transcriptional regulator | |||
| 2925 | R | Pbu13063ORF173P (100% identity) | Pin2837ORF2930P | |
| 2930 | M | M.Pbu13063ORF2589P (100% identity) | M.Pin2837ORF2930P | |
| 2935 | 384 aa hypothetical protein | |||
| 2940 | 155 aa hypothetical protein | |||
| 2945 | S | S2.Pbu13063ORF2589P (42% identity) | S1.Pin2837ORF2930P | |
| 2950 | S | S2.Pbu13063ORF173P (55% identity) | S2.Pin2837ORF2930P | |
| 2955 | integrase | |||
| 2960 | S | S2.Pin2837ORF2930P (95% identity) | S3.Pin2837ORF2930P | |
| 2965 | 0 aa hypothetical protein | |||
| 3845 | NTPase | |||
| 3850 | R | Pma19339ORFBP (97% identity) | Pin2837ORF3885P | |
| 3855 | 396 aa hypothetical protein | |||
| 3860 | S | S.PmeOORF6123P (37% identity) | S1.Pin2837ORF3885P | |
| 3865 | cell filamentation protein Fic | |||
| 3870 | S | S3.Ppa13043ORF547P (82% identity) | GGANNNNNNTGA | S2.Pin2837ORF3885P |
| 3875 | S | S1.PmeBin13ORFIP (76% identity) | S3.Pin2837ORF3885P | |
| 3880 | integrase | |||
| 3885 | M | M.PmeOORF6123P (96% identity) | M.Pin2837ORF3885P | |
| 3890 | C | C.PmeOORF6123P (94% identity) | C.Pin2837ORF3885P | |
| 3895 | 220 aa hypothetical protein | |||
| 4885 | integrase | |||
| 4890 | C | C.Tfo10960ORF2245P (100% identity) | C.Pin2837ORF4895P | |
| 4895 | M | M.Tfo10960ORF2245P (89% identity) | M.Pin2837ORF4895P | |
| 4900 | S | S.Tfo10960ORF2245P (53% identity) | S.Pin2837ORF4895P | |
| 4905 | 575 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4980 | XRE family transcriptional regulator | |||
| 4985 | M | M.Pde1525II (97% identity) | CTSAG | M.Pin2837I |
| 4990 | SAM-dependent DNA methyltransferase | |||
| 4985 | site-specific DNA-methyltransferase | |||
| 4990 | RM | Pin2836ORF3495P (92% identity) | Pin2837ORF4990P | |
| 4995 | ABC transporter ATP-binding protein | |||
| 5775 | nicotinate phosphoribosyltransferase | |||
| 5780 | R | Pin2833ORF6200P (100% identity) | Pin2837ORF5790P | |
| 5785 | 73 aa hypothetical protein | |||
| 5790 | M | M.Pin2833ORF6200P (100% identity) | M.Pin2837ORF5790P | |
| 5795 | RNA methyltransferase | |||
| 6220 | 146 aa hypothetical protein | |||
| ??? | M | M.Pin1944ORF8530P (67% identity) | M.Pin2837ORF6225P | |
| 6235 | 174 aa hypothetical protein | |||
| 6265 | 123 aa hypothetical protein | |||
| 6270 | M | M.Pin1944ORF8490P (95% identity) | M.Pin2837ORF6270P | |
| 6275 | 108 aa hypothetical protein | |||
| 6405 | 5-formyltetrahydrofolate cyclo-ligase | |||
| 6410 | M | M.PcoFMU4ORFHP (81% identity) | M.Pin2837ORF6410P | |
| 6415 | 132 aa hypothetical protein | |||
| chromosome 2 | ||||
| 9445 | 397 aa hypothetical protein | |||
| 9450 | M | M.Pin14ORF352P (97% identity) | M.Pin2837ORF9450P | |
| 9455 | 108 aa hypothetical protein | |||
| 10480 | 0 aa hypothetical protein | |||
| 10485 | C | C.Pin2834ORF6715P (100% identity) | C.Pin2837IIP | |
| 10490 | M | M1.Pin2834ORF6715P (100% identity) | GCATC | M1.Pin2837II |
| 10495 | M | M2.Pin2834ORF6715P (100% identity) | GCATC | M2.Pin2837II |
| 10500 | R | Pin2834ORF6715P (100% identity) | GCATC | Pin2837IIP |
| 10505 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 9345 | polyketide cyclase | |||
| 9350 | R | Pin2836McrCP (97% identity) | Pin2837McrCP | |
| ??? | R | Pin2838McrBP (98% identity) | Pin2837McrBP | |
| 9360 | aspartate 1-decarboxylase | |||