Xanthomonas phaseoli pv. phaseoli CFBP6982 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas phaseoli pv. phaseoli CFBP6982 RM systems
Ref: Ruh,M. et al. BMC Genomics 18 (1), 670 (2017)
REBASE ref # 25348
| Sequence length: | GenBank #: | |
| Chromosome: | 5,091,026 bp | CP020975 |
| plasmid pA: | 64,979 bp | CP020976 |
| plasmid pC: | 46,940 bp | CP020977 |
| plasmid pD: | 36,431 bp | CP020978 |
REBASE acronym: Xph6982
Org_num: 26527
All begin XppCFBP6982P_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 590 | IS3 family transposase | |||
| 595 | RM | Xph13aORF11700P (100% identity) | Xph6982ORF595P | |
| 600 | IS3 family transposase | |||
| 2185 | phage portal protein | |||
| 2195 | M | M.Xsp98C4ORF13230P (100% identity) | M.Xph6982ORF2195P | |
| 2200 | 211 aa hypothetical protein | |||
| 5285 | 311 aa hypothetical protein | |||
| 5290 | R | Xca4642ORFDP (89% identity) | Xph6982ORF5295P | |
| 5295 | M | M.Xci7119ORF8295P (98% identity) | M.Xph6982ORF5295P | |
| 5300 | site-specific integrase | |||
| 10410 | helix-turn-helix transcriptional regulator | |||
| 10415 | M | M.XphXcp25DndCP (100% identity) | M.Xph6982DndCP | |
| 10420 | 71 aa hypothetical protein | |||
| 10420 | 71 aa hypothetical protein | |||
| 10425 | M | M.XphXcp25DndDP (100% identity) | M.Xph6982DndDP | |
| 10430 | DndE family protein | |||
| plasmid pA | ||||
| 22950 | 162 aa hypothetical protein | |||
| 22945 | R | XphBRA241ORF22475P (100% identity) | CTGCAG | Xph6982ORF22940P |
| 22940 | M | M.Xsp98C4ORF22340P (100% identity) | CTGCAG | M.Xph6982ORF22940P |
| 22935 | CopG family transcriptional regulator | |||
| plasmid pC | ||||
| 23095 | recombinase | |||
| ??? | M | M.XfuRORF230P (100% identity) | CCCGGG | M.Xph6982ORF23100P |
| 23105 | R | Xph75aORF22270P (100% identity) | CCCGGG | Xph6982ORF23100P |
| 23110 | IS3 family transposase | |||
| 23345 | recombinase family protein | |||
| 24130 | M | M.Xsp98C4ORF22795P (100% identity) | CCCGGG | M.Xph6982ORF24130P |
| 23105 | R | Xph75aORF22270P (100% identity) | CCCGGG | Xph6982ORF24130P |
| 23110 | IS3 family transposase | |||
| plasmid pD | ||||
| 23485 | AAA family ATPase | |||
| ??? | RM | Xax412ORF22915P (100% identity) | Xph6982ORF23480P | |
| 23475 | recombinase family protein | |||