Pseudomonas species HLS-6 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas species HLS-6 RM systems
Ref: Hu,Y. et al. unpublished
REBASE ref # 25350
Complete sequence: 5,276,694 bp
GenBank #: CP024478
REBASE acronym: PspHLS6
Org_num: 26535
All begin CS390_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3730 | HrgA protein | |||
| 3735 | M | M.PspSL78ORF21040P (95% identity) | M.PspHLS6ORF3735P | |
| 3740 | S | S.AmaDORF6850P (39% identity) | S.PspHLS6ORF3735P | |
| 3745 | R | PspSL78ORF21040P (94% identity) | PspHLS6ORF3735P | |
| 3750 | hydrolase or metal-binding protein | |||
| 24660 | IS21 family transposase | |||
| 24665 | S | S.Pas1ORF11035P (55% identity) | S.PspHLS6ORF24675P | |
| 24670 | ATP-dependent DNA helicase RecG | |||
| 24675 | M | M2.Pae37ORF6593P (99% identity) | M2.PspHLS6ORF24675P | |
| 24680 | 161 aa hypothetical protein | |||
| 24685 | M | M1.PqiL1712ORF1925P (98% identity) | M1.PspHLS6ORF24675P | |
| 24690 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5895 | 81 aa hypothetical protein | |||
| 5900 | M | M.Pen1257ORF9280P (85% identity) | M.PspHLS6ORF5900P | |
| 5905 | 165 aa hypothetical protein | |||
| 10845 | lysis protein | |||
| 10850 | M | M.Psp21012ORF18115P (96% identity) | M.PspHLS6ORF10850P | |
| 10855 | DUF159 family protein | |||
| 10915 | 164 aa hypothetical protein | |||
| 10920 | M | M.PsoAP1ORF15895P (97% identity) | M.PspHLS6ORF10920P | |
| 10925 | reverse transcriptase | |||
| 15330 | 104 aa hypothetical protein | |||
| 15335 | M | M.PpuS1312ORF6215P (80% identity) | M.PspHLS6ORF15335P | |
| 15340 | 164 aa hypothetical protein | |||
| 16325 | 106 aa hypothetical protein | |||
| 16330 | M | M.PflPS652ORF1995P (92% identity) | M.PspHLS6ORF16330P | |
| 16335 | AlpA family phage regulatory protein | |||
| 21140 | 657 aa hypothetical protein | |||
| 21145 | S | S.Pae441ORF4729P (91% identity) | S.PspHLS6ORF21150P | |
| 21150 | M | M.Ppu191ORF3165P (97% identity) | M.PspHLS6ORF21150P | |
| ??? | R | PpuUV4ORF22435P (72% identity) | PspHLS6ORF21150P | |
| 21165 | 0 aa hypothetical protein | |||