Ref: Chen,C.C. and Chiu,S.H. unpublished

REBASE ref # 25853

Sequence length:GenBank #:
Chromosome: 1,507,589 bp CP024063
plasmid unnamed1: 250,219 bp CP024064
plasmid unnamed2: 269,701 bp CP024065

REBASE acronym: Lsa12574

Org_num: 26454

 

All begin CR249_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
7675 78 aa hypothetical protein
7680 R Lsa210215ORF5130P (98% identity) Lsa12574ORF7685P
7685 M M.LsaZLp4bORFFP (99% identity) M.Lsa12574ORF7685P
7690 S S1.Lsa12574ORF7730P (87% identity) S1.Lsa12574ORF7685P
??? S S1.Esp3177ORFEP (46% identity) S2.Lsa12574ORF7685P
7700 site-specific integrase
 
7700 site-specific integrase
??? S S2.Lsa12574ORF7730P (19% identity) S1.Lsa12574ORF7720P
??? S S2.LsaAR809ORF785P (43% identity) S2.Lsa12574ORF7720P
7710 restriction endonuclease subunit S
??? S S2.Lsa12574ORF7685P (25% identity) S3.Lsa12574ORF7720P
7715 S S1.Lsa12574ORF7730P (83% identity) S4.Lsa12574ORF7720P
7720 M M.Lsa12574ORF7685P (99% identity) M.Lsa12574ORF7720P
7725 45 aa hypothetical protein
 
plasmid unnamed1
 
8990 phage tail protein
??? M M.LsaLPM01ORFAP (48% identity) M.Lsa12574ORF7730P
7740 S S1.Lsa12574ORF7685P (87% identity) S1.Lsa12574ORF7730P
7745 restriction endonuclease subunit S
7750 site-specific integrase
7755 S S1.LsaS01ORF4370P (58% identity) S2.Lsa12574ORF7730P
7760 PTS sugar transporter subunit IIC
 
plasmid unnamed2
 
9020 80 aa hypothetical protein
9025 M M.LsaH1ORF770P (98% identity) M.Lsa12574ORF9025P
9030 S S.LsaRenORF1873P (98% identity) S.Lsa12574ORF9025P
9035 site-specific integrase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1475 94 aa hypothetical protein
1485 RM LsaRenORF458P (100% identity) Lsa12574ORF1485P
1490 M LkeM1ORF1865P (13% identity) M1.Lsa12574ORF1485P
??? M M1.LsaRenORF458P (99% identity) M2.Lsa12574ORF1485P
1495 dipeptidase PepV
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
5690 60 aa hypothetical protein
5695 M M.Lsa3154ORF1480P (99% identity) M.Lsa12574ORF5695P
5700 R Lsa3154ORF1480P (98% identity) Lsa12574ORF5695P
5705 430 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
5175 protein-tyrosine-phosphatase
5180 R LsaSGL03ORF410P (99% identity) Lsa12574ORF5180P
5185 IMP dehydrogenase
 
5670 0 aa hypothetical protein
5675 R LsaDJMcrBP (98% identity) Lsa12574McrBP
5680 R LsaDJMcrCP (94% identity) Lsa12574McrCP
5685 296 aa hypothetical protein