Planctomyces limnophilus DSM 3776 |
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Putative Planctomyces limnophilus DSM 3776 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14259
| Sequence length: | GenBank #: | |
| Chromosome: | 5,423,075 bp | CP001744 (NC_014148) |
| plasmid pPLIM01: | 37,010 bp | CP001745 (NC_014149) |
REBASE acronym: PliM
Org_num: 5512
All begin Plim_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1216 | 224 aa hypothetical protein | |||
| 1217 | R | BvoTYQ1ORF21950P (72% identity) | CNACNNNNGTAA | PliMIIIP |
| 1218 | 195 aa hypothetical protein | |||
| 1219 | 77 aa hypothetical protein | |||
| ??? | S | S.Mzi21339ORF7335P (29% identity) | CNACNNNNGTAA | S.PliMIII |
| ??? | M | M.BvoTYQ1ORF21950P (72% identity) | CNACNNNNGTAA | M.PliMIII |
| 1222 | 438 aa hypothetical protein | |||
| 2650 | replication initiation factor | |||
| 2651 | M | M.NdeGORF2625P (86% identity) | AAGNNNNNNNTGGG | M.PliMII |
| 2652 | S | S.PspMLORF6035P (44% identity) | AAGNNNNNNNTGGG | S.PliMII |
| 2653 | AAA-4 family protein | |||
| 2654 | type III restriction protein res subunit | |||
| 2655 | 352 aa conserved hypothetical protein | |||
| 2656 | R | AmxKORF1535P (73% identity) | AAGNNNNNNNTGGG | PliMIIP |
| 2657 | sulfatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2103 | Bile acid:sodium symporter | |||
| 2104 | M | M.PbaSpb1ORF20570P (49% identity) | M.PliMORF2104P | |
| 2105 | 273 aa hypothetical protein | |||
| 2984 | 4-phosphopantetheinyl transferase | |||
| 2985 | RM | Pba412ORF2974P (68% identity) | CGCCGAC | PliMI |
| 2986 | 78 aa hypothetical protein | |||
| 3079 | PglZ domain protein | |||
| 3080 | RM | MspHK10ORF2375P (56% identity) | PliMORF3080P | |
| 3081 | 1208 aa conserved hypothetical protein | |||
| 3572 | RNA binding S1 domain protein | |||
| 3573 | M | M.PbaSpb1ORF720P (75% identity) | M.PliMORF3573P | |
| 3574 | protein of unknown function DUF323 | |||
| plasmid pPLIM01 | ||||
| 4274 | 44 aa hypothetical protein | |||
| 4275 | M | M1.Pba412ORF2015P (41% identity) | TGGCCA | M.PliMORF4275P |
| 4276 | 55 aa hypothetical protein | |||