Escherichia coli FDAARGOS_433 |
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Putative Escherichia coli FDAARGOS_433 RM systems
Ref: Croxen,M. et al. unpublished
REBASE ref # 25299
| Sequence length: | GenBank #: | |
| Chromosome: | 4,711,093 bp | CP023899 |
| plasmid unnamed1: | 101,274 bp | CP023903 |
| plasmid unnamed2: | 91,648 bp | CP023895 |
| plasmid unnamed3: | 83,988 bp | CP023896 |
REBASE acronym: Eco433
Org_num: 26405
All begin CRN16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14900 | IS1 family transposase | |||
| 14905 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco433IP |
| 14910 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco433I |
| 14915 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco433I |
| 14920 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3440 | lysis protein S | |||
| 3445 | M | M.EcoYA1ORF19930P (100% identity) | M.Eco433ORF3445P | |
| 3450 | TrmB family transcriptional regulator | |||
| 3460 | 229 aa hypothetical protein | |||
| 3465 | M | M.EcoST131ORF16015P (100% identity) | M.Eco433ORF3465P | |
| 3470 | antitermination protein | |||
| 10830 | protein DamX | |||
| 10835 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco433DamP |
| 10840 | ribulose-phosphate 3-epimerase | |||
| 11490 | transporter | |||
| 11495 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco433ORF11495P |
| 11500 | integrase | |||
| 18295 | phosphohydrolase | |||
| 18300 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco433Dcm |
| 18305 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco433DcmP |
| 18310 | drug/metabolite exporter YedA | |||
| 24445 | endonuclease | |||
| 24450 | M | M.EcoTH03ORF14660P (99% identity) | GATC | M.Eco433ORF24450P |
| 24455 | 75 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 26135 | 73 aa hypothetical protein | |||
| 26140 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco433ORF26140P | |
| 26145 | 0 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 405 | 59 aa hypothetical protein | |||
| 410 | M | M.SenST46ORF25580P (100% identity) | M.Eco433ORF410P | |
| 415 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 710 | recombination-associated protein RdgC | |||
| 715 | M | M.EcoUKDORF25705P (99% identity) | M.Eco433ORF715P | |
| 730 | 63 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22620 | isocitrate dehydrogenase | |||
| 22625 | R | EcosEC27McrCP (100% identity) | Eco433McrCP | |
| 22630 | R | EcoteDMcrBP (100% identity) | Eco433McrBP | |
| 22635 | DNA-invertase | |||