Raoultella planticola FDAARGOS_429 |
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Putative Raoultella planticola FDAARGOS_429 RM systems
Ref: Croxen,M. et al. unpublished
REBASE ref # 25299
| Sequence length: | GenBank #: | |
| Chromosome: | 5,616,089 bp | CP023874 |
| plasmid unnamed: | 262,185 bp | CP023875 |
REBASE acronym: Rpl429
Org_num: 26388
All begin CRT62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23730 | IS3 family transposase | |||
| 23735 | M | M.Rpl430I (100% identity) | TTCANNNNNNTCG | M.Rpl429I |
| 23740 | S | S.Rpl430I (100% identity) | TTCANNNNNNTCG | S.Rpl429I |
| 23745 | R | Rpl430IP (100% identity) | TTCANNNNNNTCG | Rpl429IP |
| 23750 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1395 | cell division protein DamX | |||
| 1400 | M | M.RplWA001DamP (100% identity) | GATC | M.Rpl429DamP |
| 1405 | ribulose-phosphate 3-epimerase | |||
| 6705 | NinG family protein | |||
| 6710 | M | M.Rpl430ORF910P (100% identity) | GATC | M.Rpl429ORF6710P |
| 6715 | antitermination protein | |||
| 8980 | phosphohydrolase | |||
| 8985 | M | M.RplGODADcmP (100% identity) | M.Rpl429DcmP | |
| 8990 | V | V.Rpl430DcmP (100% identity) | V.Rpl429DcmP | |
| 8995 | drug/metabolite exporter YedA | |||
| 10935 | 232 aa hypothetical protein | |||
| 10940 | M | M.Rpl430ORF23910P (100% identity) | M.Rpl429ORF10940P | |
| 10945 | 166 aa hypothetical protein | |||
| 18070 | DUF1133 domain-containing protein | |||
| 18075 | M | M.Rpl430ORF16770P (100% identity) | GATC | M.Rpl429ORF18075P |
| 18080 | 197 aa hypothetical protein | |||
| 23675 | SH3 domain-containing protein | |||
| 23680 | R | Rpl430ORF11165P (100% identity) | Rpl429ORF23680P | |
| 23685 | RES domain-containing protein | |||
| plasmid unnamed | ||||
| 27325 | 64 aa hypothetical protein | |||
| 27330 | M | M.Rpl428ORF15P (100% identity) | M.Rpl429ORF27330P | |
| 27335 | 73 aa hypothetical protein | |||
| 27560 | resolvase | |||
| 27565 | R | YpsR1ORFAP (99% identity) | CCWGG | Rpl429ORF27570P |
| 27570 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Rpl429ORF27570P |
| 27575 | IS1 family transposase | |||
| 28295 | 76 aa hypothetical protein | |||
| 28300 | M | M.Sne174ORF27605P (100% identity) | M.Rpl429ORF28300P | |
| 28305 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17040 | integrase | |||
| 17045 | M | M.Rpl430II (100% identity) | CAAACC | M.Rpl429II |
| 17050 | R | Rpl430IIP (100% identity) | CAAACC | Rpl429IIP |
| 17055 | shufflon system plasmid conjugative transfer | |||