Vibrio parahaemolyticus HA2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio parahaemolyticus HA2 RM systems
Ref: Liu,X. and Chen,C. unpublished
REBASE ref # 25335
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,423,876 bp | CP023710 |
| chromosome 2: | 1,854,765 bp | CP023709 |
REBASE acronym: VpaHA2
Org_num: 26473
All begin CO725_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10325 | metal-dependent hydrolase | |||
| 10330 | R | VpaFB11ORF12235P (99% identity) | VpaHA2ORF10340P | |
| 10335 | S | S.VpaFB11ORF12235P (65% identity) | S.VpaHA2ORF10340P | |
| 10340 | M | M.Vdi105II (94% identity) | M.VpaHA2ORF10340P | |
| 10345 | site-specific recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15645 | cell division protein DamX | |||
| 15650 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaHA2DamP |
| 15655 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 24325 | 141 aa hypothetical protein | |||
| 24330 | R | VpaSM4ORFCP (99% identity) | VpaHA2ORF24335P | |
| 24335 | M | M.VpeOK1ORFIP (99% identity) | M.VpaHA2ORF24335P | |
| 24340 | 363 aa hypothetical protein | |||
| chromosome 2 | ||||
| 1120 | 191 aa hypothetical protein | |||
| 1125 | R | Vha345VP (99% identity) | VpaHA2ORF1130P | |
| 1130 | M | M.Vha9417ORFEP (99% identity) | M.VpaHA2ORF1130P | |
| 1135 | 208 aa hypothetical protein | |||