Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 RM systems
Ref: McClelland,M. et al. Nat. Genet. 36 (12), 1268-1274 (2004)
REBASE ref # 8823
Complete sequence: 4,585,229 bp
GenBank #: CP000026 (NC_006511)
REBASE acronym: SptA
Org_num: 4060
All begin SPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4344 | 131 aa conserved hypothetical protein | |||
| 4345 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SptAIII |
| 4346 | M | M.SenAKUORF4035P (100% identity) | GAANNNNNNNNTCGC | M.SptAIII |
| 4347 | R | SenAKUORF4035P (100% identity) | GAANNNNNNNNTCGC | SptAIIIP |
| 4348 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 877 | 231 aa conserved hypothetical protein | |||
| 878 | M | M.SenH3X1DcmP (100% identity) | CCWGG | M.SptADcm |
| 879 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SptADcmP |
| 880 | membrane protein | |||
| 2590 | 800 aa conserved hypothetical protein | |||
| 2591 | M | M.StyTORF4329P (100% identity) | GATC | M.SptAORF2591P |
| 2592 | exonuclease | |||
| 2623 | phage gene | |||
| 2624 | M | M.SenAKUORF2445P (100% identity) | GATC | M.SptAORF2624P |
| 2625 | phage gene | |||
| 3252 | Fis DNA-binding protein | |||
| 3253 | M | M.SenAKUORF3039P (100% identity) | ATGCAT | M.SptAORF3253P |
| 3254 | periplasmic protein | |||
| 3348 | ribulose-phosphate 3-epimerase | |||
| 3349 | M | M.SenAKUDamP (100% identity) | M.SptADamP | |
| 3350 | DamX protein | |||
| 4288 | integrase | |||
| 4289 | M | M.SenS922ORF19305P (100% identity) | CAGCTG | M.SptAI |
| 4290 | C | C.SenS922ORF19305P (100% identity) | C.SptAI | |
| 4291 | R | SenAKUORF3985P (100% identity) | CAGCTG | SptAIP |
| 4292 | 188 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2364 | 33 aa hypothetical protein | |||
| 2365 | R | SenAKUORF2207P (100% identity) | CAGAG | SptAIIP |
| 2366 | M | M.SenAKUORF2207P (100% identity) | CAGAG | M.SptAII |
| 2367 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4347 | subunit R of type I restriction-modification | |||
| 4348 | R | SenAKUMrrP (100% identity) | SptAMrrP | |
| 4349 | 95 aa hypothetical protein | |||