Escherichia coli M12 |
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Putative Escherichia coli M12 RM systems
Ref: Olson,M.A. et al. unpublished
REBASE ref # 25260
Complete sequence: 4,984,145 bp
GenBank #: CP023644
REBASE acronym: EcoM12
Org_num: 26266
All begin CO715_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22900 | restriction endonuclease | |||
| 22905 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoM12ORF22910P |
| 22910 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoM12ORF22910P |
| 22915 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoM12ORF22910P |
| 22920 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3990 | cell division protein DamX | |||
| 3995 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoM12DamP |
| 4000 | ribulose-phosphate 3-epimerase | |||
| 4625 | phosphohydrolase | |||
| 4630 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoM12DcmP |
| 4635 | V | V.Ecostr9DcmP (74% identity) | V.EcoM12DcmP | |
| 4640 | EamA family transporter | |||
| 7015 | NinE family protein | |||
| 7020 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoM12ORF7020P |
| 7025 | recombination protein NinB | |||
| 13340 | Fis family transcriptional regulator | |||
| 13345 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoM12ORF13345P |
| 13350 | 53 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22895 | GTPase | |||
| 22900 | R | EcosS1MrrP (100% identity) | EcoM12MrrP | |
| 22905 | type I restriction-modification system | |||