Methylomonas koyamae LM6 |
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Putative Methylomonas koyamae LM6 RM systems
Ref: Lee,D.-H. et al. unpublished
REBASE ref # 25249
| Sequence length: | GenBank #: | |
| Chromosome: | 4,894,002 bp | CP023669 |
| plasmid pLM6: | 186,658 bp | CP023670 |
REBASE acronym: MkoLM6
Org_num: 26242
All begin MKLM6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 55 | transposase | |||
| 56 | R | MkoEYORF390P (74% identity) | MkoLM6ORF61P | |
| 57 | 301 aa hypothetical protein | |||
| 58 | Uncharacterized protein | |||
| ??? | S | S.Mko49807ORF22665P (100% identity) | S.MkoLM6ORF61P | |
| 60 | Excinuclease ABC C subunit domain protein | |||
| 61 | M | M.MspDH1ORF130P (94% identity) | M.MkoLM6ORF61P | |
| 62 | glutamine-hydrolyzing GMP synthase | |||
| 471 | 287 aa hypothetical protein | |||
| 472 | M | M.MkoMY1ORF2200P (98% identity) | M.MkoLM6ORF472P | |
| 473 | 118 aa hypothetical protein | |||
| 474 | Uncharacterized protein | |||
| 475 | S | S.Mko49807ORF11595P (74% identity) | S.MkoLM6ORF472P | |
| 476 | IS5 family transposase | |||
| 477 | Uncharacterized protein | |||
| 478 | 89 aa hypothetical protein | |||
| 479 | R | Mko49807ORF11595P (100% identity) | MkoLM6ORF472P | |
| 480 | 46 aa hypothetical protein | |||
| 1044 | 84 aa hypothetical protein | |||
| 1045 | M | M.Mko49807ORF10030P (100% identity) | M.MkoLM6ORF1045P | |
| 1046 | S | S.Mko49807ORF10030P (95% identity) | S.MkoLM6ORF1045P | |
| 1047 | pseudogene | |||
| 1465 | metal-dependent hydrolase | |||
| 1466 | R | Mko49807ORF23170P (100% identity) | MkoLM6ORF1473P | |
| 1467 | cell filamentation protein Fic | |||
| 1468 | S | S.Mko49807ORF23170P (90% identity) | S.MkoLM6ORF1473P | |
| 1469 | 164 aa hypothetical protein | |||
| 1470 | 90 aa hypothetical protein | |||
| 1471 | 73 aa hypothetical protein | |||
| 1472 | 78 aa hypothetical protein | |||
| 1473 | M | M.Mko49807ORF17230P (100% identity) | M.MkoLM6ORF1473P | |
| 1474 | 197 aa hypothetical protein | |||
| 3218 | HipA domain-containing protein | |||
| 3219 | M | M.MspGJ1I (96% identity) | M.MkoLM6ORF3219P | |
| 3220 | S | S1.MspGJ1I (58% identity) | S.MkoLM6ORF3219P | |
| 3221 | R | MspGJ1IP (96% identity) | MkoLM6ORF3219P | |
| 3222 | Helix-turn-helix domain-containing protein | |||
| 3672 | 112 aa hypothetical protein | |||
| 3673 | R | Mko49807ORF6120P (97% identity) | MkoLM6ORF3675P | |
| 3674 | S | S.MspDH1ORF18145P (58% identity) | S.MkoLM6ORF3675P | |
| 3675 | M | M.MspDH1ORF18145P (96% identity) | M.MkoLM6ORF3675P | |
| 3676 | 287 aa hypothetical protein | |||
| 3734 | ATPase | |||
| 3735 | R | Mko49807ORF5810P (100% identity) | MkoLM6ORF3736P | |
| 3736 | M | M.Mko49807ORF5810P (100% identity) | M.MkoLM6ORF3736P | |
| 3737 | 160 aa hypothetical protein | |||
| 3738 | S | S.Mko49807ORF5810P (99% identity) | S.MkoLM6ORF3736P | |
| 3739 | 207 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2790 | 359 aa hypothetical protein | |||
| 2791 | M | M.Mko49807ORF11120P (83% identity) | M.MkoLM6ORF2791P | |
| 2792 | R | MkoMY1ORF7745P (99% identity) | MkoLM6ORF2791P | |
| 2793 | 73 aa hypothetical protein | |||
| plasmid pLM6 | ||||
| 4386 | 165 aa hypothetical protein | |||
| 4387 | RM | MkoEYORF43650P (67% identity) | MkoLM6ORF4387P | |
| 4388 | S | S.DbaSRB1ORF759P (58% identity) | S.MkoLM6ORF4387P | |
| 4389 | alkaline phosphatase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 848 | RES domain-containing protein | |||
| 849 | R | McaI01ORF3790P (63% identity) | MkoLM6ORF850P | |
| 850 | M | M.McaIT9ORF1053P (47% identity) | M.MkoLM6ORF850P | |
| 851 | 176 aa hypothetical protein | |||
| 1468 | type I restriction enzyme subunit S | |||
| 1469 | M | M.Mae44ORF4749P (4% identity) | M.MkoLM6ORF1469P | |
| 1470 | 90 aa hypothetical protein | |||
| 1581 | 311 aa hypothetical protein | |||
| 1582 | M | M.Mko49807ORF20135P (100% identity) | M.MkoLM6ORF1582P | |
| 1583 | Zeta toxin family protein | |||
| 1584 | 61 aa hypothetical protein | |||
| 1585 | DNA polymerase subunit beta | |||
| 1586 | R | Mko49807ORF20135P (100% identity) | MkoLM6ORF1582P | |
| 1587 | 540 aa hypothetical protein | |||