Prevotella ruminicola 23 |
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Putative Prevotella ruminicola 23 RM systems
Ref: Brinkac,L. et al. unpublished
REBASE ref # 11665
Complete sequence: 3,619,559 bp
GenBank #: CP002006 (NC_014033)
REBASE acronym: Pru23
Org_num: 5919
All begin PRU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1001 | 306 aa conserved hypothetical protein | |||
| 1002 | M | M1.MbaX1ORFJP (41% identity) | GATC | M.Pru23ORF1002P |
| 1003 | type III restriction-modification system, Res | |||
| 2886 | DNA-binding protein | |||
| 2887 | M | M.Aru5522ORF1012P (47% identity) | M.Pru23ORF2887P | |
| 2888 | 404 aa conserved hypothetical protein | |||
| 2889 | S | S.DfaPA1I (15% identity) | S.Pru23ORF2887P | |
| 2890 | R | TbaMOXQORF380P (37% identity) | Pru23ORF2887P | |
| 2891 | 289 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 357 | ISPru1, transposase orfA | |||
| 358 | V | V.PspE1522ORF7525P (68% identity) | V.Pru23ORF361P | |
| 359 | 772 aa hypothetical protein | |||
| 360 | R | PspE1514ORF4535P (42% identity) | Pru23ORF361P | |
| 361 | M | M1.Gme92ORFW3P (79% identity) | GAGCTC | M1.Pru23ORF361P |
| 362 | M | M2.Gme92ORFW3P (63% identity) | GAGCTC | M2.Pru23ORF361P |
| 363 | conserved domain protein | |||
| 664 | mutator mutT protein | |||
| 665 | R | PmeBin107ORFAP (53% identity) | GRCGYC | Pru23ORF666P |
| 666 | M | M.PmeBin107ORFAP (44% identity) | GRCGYC | M.Pru23ORF666P |
| 667 | conserved domain protein | |||
| 936 | 73 aa conserved hypothetical protein | |||
| 937 | R | PspRep29ORF1475P (52% identity) | GGCC | R1.Pru23ORF938P |
| 938 | M | M.Hpa788ORF3795P (80% identity) | GGCC | M.Pru23ORF938P |
| 939 | R | Bce1407ORF2765P (30% identity) | GGCC | R2.Pru23ORF938P |
| 940 | 80 aa hypothetical protein | |||
| 1004 | 765 aa conserved hypothetical protein | |||
| 1005 | M | M.UbaFSORFXP (28% identity) | GATC | M.Pru23ORF1005P |
| 1006 | conserved domain protein | |||
| 1134 | 759 aa conserved hypothetical protein | |||
| 1135 | RM | SpaC1AORFAP (58% identity) | Pru23ORF1135P | |
| 1138 | 259 aa hypothetical protein | |||
| 2422 | HNH endonuclease | |||
| 2423 | M | M.PspE228ORF3305P (59% identity) | M.Pru23ORF2423P | |
| 2424 | conserved domain protein | |||