|
Putative Weissella paramesenteroides FDAARGOS_414 RM systems
Ref: Minogue,T. et al. unpublished
REBASE ref # 25231
Complete sequence: 1,947,910 bp
GenBank #: CP023501
REBASE acronym: Wpa414
Org_num: 26186
All begin CO680_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1035 | 117 aa hypothetical protein | |||
1040 | R | WciJW15ORF12180P (77% identity) | Wpa414ORF1045P | |
1045 | M | M.PpeYK1ORFAP (86% identity) | M.Wpa414ORF1045P | |
1050 | S | S.Lrh21ORF11P (33% identity) | S1.Wpa414ORF1045P | |
1055 | S | S1.Bpu130ORF8690P (31% identity) | S2.Wpa414ORF1045P | |
1060 | S | S4.Lla40ORF5530P (70% identity) | S3.Wpa414ORF1045P | |
1065 | site-specific integrase | |||
8365 | pyruvate oxidase | |||
8370 | R | WpaW31ORF9915P (98% identity) | Wpa414ORF8375P | |
8375 | M | M.WpaW31ORF9915P (98% identity) | M.Wpa414ORF8375P | |
??? | S | S2.WpaW31ORF9915P (48% identity) | S1.Wpa414ORF8375P | |
??? | S | S1.HspM105ORF21030P (35% identity) | S2.Wpa414ORF8375P | |
8385 | S | S2.Osi15228ORF7335P (53% identity) | S3.Wpa414ORF8375P | |
8390 | site-specific integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
520 | 30S ribosomal protein S9 | |||
525 | R | Wco830DptFP (53% identity) | Wpa414DptFP | |
530 | DNA phosphorothioation-dependent restriction | |||
525 | DNA phosphorothioation-dependent restriction | |||
530 | R | Wco830DptGP (44% identity) | Wpa414DptGP | |
535 | DUF87 domain-containing protein | |||
530 | DNA phosphorothioation-dependent restriction | |||
535 | R | Wco830DptHP (47% identity) | Wpa414DptHP | |
540 | 85 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
8390 | site-specific integrase | |||
8395 | R | WpaW31MrrP (99% identity) | Wpa414MrrP | |
8400 | formate-nitrite transporter |