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Putative Neisseria meningitidis 12-176 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,168,615 bp
GenBank #: CP021518
REBASE acronym: Nme12176
Org_num: 18029
All begin CCD86_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
2735 | M | M.Nme98ORF2765P (100% identity) | M.Nme12176ORF2735P | |
2740 | cell filamentation protein Fic | |||
2745 | S | S.NmeAORF1038P (48% identity) | S1.Nme12176ORF2735P | |
2750 | S | type I restriction endonuclease subunit S | S2.Nme12176ORF2735P | |
2755 | IS1595 family transposase ISNme3 | |||
2760 | S | S3.Nme98ORF2765P (100% identity) | S3.Nme12176ORF2735P | |
2765 | R | Nme98ORF2765P (100% identity) | Nme12176ORF2735P | |
2770 | ATP-dependent Clp protease ATP-binding subunit | |||
4815 | ABC transporter | |||
4820 | M | M.Nme98I (100% identity) | M.Nme12176ORF4820P | |
4825 | S | 80 aa hypothetical protein | S1.Nme12176ORF4820P | |
4830 | IS1595 family transposase ISNme3 | |||
4835 | S | S.Nme98I (77% identity) | S2.Nme12176ORF4820P | |
4840 | R | Nme98IP (100% identity) | Nme12176ORF4820P | |
4845 | AAA family ATPase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
45 | IS5 family transposase | |||
50 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme12176ORF50P |
55 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme12176ORF50P |
60 | 184 aa hypothetical protein | |||
2715 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
2720 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme12176ORF2720P |
??? | R | Nme98ORF2750P (100% identity) | CCAGA | Nme12176ORF2720P |
2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
3405 | transposase | |||
3410 | M | M.Nme98ORF3460P (100% identity) | M.Nme12176ORF3410P | |
3415 | HNH endonuclease | |||
4930 | 3-isopropylmalate dehydratase small subunit | |||
4935 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme12176ORF4935P |
4940 | R | Nme95IIP (100% identity) | GGNNCC | Nme12176ORF4935P |
4945 | 3-isopropylmalate dehydrogenase | |||
5145 | ribonucleotide-diphosphate reductase subunit | |||
5150 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme12176ORF5155P |
5155 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme12176ORF5155P |
5160 | ribonucleoside-diphosphate reductase subunit | |||
6970 | 243 aa hypothetical protein | |||
6975 | RM | Nme98ORF7020AP (100% identity) | Nme12176ORF6975AP | |
6980 | RM | Nme98ORF7020BP (100% identity) | Nme12176ORF6975BP | |
6985 | pilS cassette | |||
10395 | RNA-binding transcriptional accessory protein | |||
10400 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme12176ORF10400P |
10405 | M | Rieske (2Fe-2S) protein | GGTGA | M2.Nme12176ORF10400P |
10410 | UDP-glucose 4-epimerase GalE | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5645 | tRNA pseudouridine(55) synthase TruB | |||
5650 | M | M.Nme16306ORF5870P (98% identity) | ACACC | M.Nme12176ORF5650P |
5655 | R | Nme98ORF5695P (100% identity) | ACACC | Nme12176ORF5650P |
5660 | alpha-hydroxy-acid oxidizing enzyme |