Phaeobacter gallaeciensis P129 |
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Putative Phaeobacter gallaeciensis P129 RM systems
Ref: Freese,H.M. et al. Front Microbiol 8, 1659 (2017)
REBASE ref # 25228
| Sequence length: | GenBank #: | |
| Chromosome: | 3,707,098 bp | CP021040 |
| plasmid pP129_f: | 15,022 bp | CP021046 |
REBASE acronym: PgaP129
Org_num: 26176
All begin PhaeoP129_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 140 | 500 aa hypothetical protein | |||
| 141 | M | M.PgaP128III (100% identity) | AGCNNNNNNGTCY | M.PgaP129III |
| 142 | S | S.PgaP128III (100% identity) | AGCNNNNNNGTCY | S.PgaP129III |
| 143 | 187 aa hypothetical protein | |||
| 144 | R | PgaP128IIIP (100% identity) | AGCNNNNNNGTCY | PgaP129IIIP |
| 145 | 76 aa hypothetical protein | |||
| 348 | EcoKMrr | |||
| 349 | S | S.PgaP128II (100% identity) | CRAANNNNNNNNTGCT | S.PgaP129II |
| 350 | M | M.PgaP128II (100% identity) | CRAANNNNNNNNTGCT | M.PgaP129II |
| 351 | R | PgaP128IIP (100% identity) | CRAANNNNNNNNTGCT | PgaP129IIP |
| 352 | resolvase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 440 | 690 aa hypothetical protein | |||
| 441 | RM | PgaP128IV (100% identity) | GGCGAG | PgaP129V |
| 442 | 37 aa hypothetical protein | |||
| 448 | 67 aa hypothetical protein | |||
| 449 | M | M.PinP66ORF1685P (100% identity) | M.PgaP129ORF449P | |
| 450 | 63 aa hypothetical protein | |||
| 2396 | 68 aa hypothetical protein | |||
| 2398 | M | M.PgaP128ORF2398P (100% identity) | M.PgaP129ORF2398P | |
| 2399 | R | PgaP128ORF2398P (100% identity) | PgaP129ORF2398P | |
| 2402 | aminotransferase class-III | |||
| 2848 | circadian clock protein KaiC | |||
| 2849 | M | M.PgaP128ORF2850P (100% identity) | M.PgaP129ORF2849P | |
| 2850 | crown gall tumor protein VirC1 | |||
| 3280 | adenylate/guanylate cyclase | |||
| 3281 | M | M.PgaP128I (100% identity) | GANTC | M.PgaP129I |
| 3282 | ribonuclease HII | |||
| plasmid pP129_f | ||||
| 4188 | 90 aa hypothetical protein | |||
| 4189 | M | M.MstAR4ORFEP (64% identity) | CACNNNGTG | M.PgaP129IV |
| 4190 | R | MstAR4ORFEP (66% identity) | CACNNNGTG | PgaP129IVP |
| 4191 | Site-specific recombinase, DNA invertase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 347 | Hemolysin-type calcium-binding protein repeat | |||
| 348 | R | PgaP128Mrr2P (100% identity) | PgaP129MrrP | |
| 349 | type I restriction modification system, | |||