Escherichia coli IHE3034 |
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Putative Escherichia coli IHE3034 RM systems
Ref: Moriel,D.G. et al. Proc. Natl. Acad. Sci. U.S.A. (2010) In press
REBASE ref # 11661
Complete sequence: 5,108,383 bp
GenBank #: CP001969
REBASE acronym: Eco3034
Org_num: 5915
All begin ECOK1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4853 | 113 aa conserved hypothetical protein | |||
| 4854 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco3034ORF4855P |
| 4855 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco3034ORF4855P |
| 4856 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco3034ORF4855P |
| 4857 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 533 | 64 aa conserved hypothetical protein | |||
| 534 | M | M.EcosE1ORFAP (100% identity) | M.Eco3034ORF534P | |
| 535 | 64 aa hypothetical protein | |||
| 1266 | ninB protein | |||
| 1267 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco3034ORF1267P |
| 1268 | crossover junction endodeoxyribonuclease RusA | |||
| 1428 | 65 aa conserved hypothetical protein | |||
| 1429 | M | M.SboBSORF1444P (100% identity) | M.Eco3034ORF1429P | |
| 1432 | 75 aa hypothetical protein | |||
| 2075 | transporter, 10 TMS drug/metabolite exporter | |||
| 2074 | V | V.SflC32DcmP (74% identity) | V.Eco3034DcmP | |
| 2076 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco3034DcmP |
| 2077 | metal-dependent phosphohydrolase | |||
| 2848 | transcriptional regulator, AlpA family | |||
| 2849 | M | 106 aa hypothetical protein | GATC | M.Eco3034ORF2849P |
| 2850 | 64 aa conserved hypothetical protein | |||
| 3008 | LexA repressor | |||
| 3009 | M | M.EcoY26ORF4515P (99% identity) | GATC | M.Eco3034ORF3009P |
| 3010 | 164 aa conserved hypothetical protein | |||
| 3682 | DNA-binding protein Fis | |||
| 3683 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3034ORF3683P |
| 3684 | 68 aa conserved hypothetical protein | |||
| 3799 | ribulose-phosphate 3-epimerase | |||
| 3800 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3034DamP |
| 3801 | DamX protein | |||
| 4899 | 164 aa conserved hypothetical protein | |||
| 4900 | M | M.SflN101ORF11410P (99% identity) | GATC | M.Eco3034ORF4900P |
| 4901 | LexA repressor | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2969 | DinI family protein | |||
| 2970 | R | EspFAAGmrSDP (100% identity) | Eco3034GmrSDP | |
| 2971 | structural protein | |||
| 4856 | type I restriction enzyme EcoKI R protein | |||
| 4857 | R | EcosS1MrrP (100% identity) | Eco3034MrrP | |
| 4858 | CobW/P47K family protein | |||