Salmonella enterica subsp. enterica serovar Typhimurium WW012 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium WW012 RM systems
Ref: Wang,W. unpublished
REBASE ref # 25196
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,167 bp | CP022168 |
| plasmid pWW012: | 151,609 bp | CP022169 |
REBASE acronym: SenWW012
Org_num: 26114
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | Mrr restriction system protein | |||
| ??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenWW012IIP |
| ??? | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenWW012II |
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenWW012II |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.StyTDamP (100% identity) | GATC | M.SenWW012DamP |
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.SenWW012IV |
| ??? | M | M.SensSZL38ORF19965P (100% identity) | M.SenWW012ORFBP | |
| ??? | M | M.Ssp17155ORFGP (100% identity) | M.SenWW012ORFCP | |
| ??? | M | M.StyTORF1914P (100% identity) | M.SenWW012ORFDP | |
| ??? | M | M.Ssp17155ORFIP (100% identity) | M.SenWW012ORFEP | |
| ??? | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenWW012DcmP |
| ??? | V | V.StyUK1DcmP (100% identity) | V.SenWW012DcmP | |
| ??? | RM | StyUK1IV (100% identity) | GATCAG | SenWW012III |
| plasmid pWW012 | ||||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenWW012ORFHP |
| ??? | M | M.YpsF1ORFDP (100% identity) | M.SenWW012ORFJP | |
| ??? | DNA restriction methylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyUK1IP (100% identity) | CAGAG | SenWW012IP |
| ??? | M | M.StyUK1I (100% identity) | CAGAG | M.SenWW012I |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyUK1MrrP (100% identity) | SenWW012MrrP | |
| ??? | Endonuclease R | |||