Escherichia coli 1283 |
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Putative Escherichia coli 1283 RM systems
Ref: Argyle,S.A. unpublished
REBASE ref # 25109
| Sequence length: | GenBank #: | |
| Chromosome: | 4,677,088 bp | CP023371 |
| plasmid p109: | 109,207 bp | CP023372 |
| plasmid p92: | 92,420 bp | CP023376 |
REBASE acronym: Eco1283
Org_num: 25851
All begin CNQ51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9765 | cold-shock protein | |||
| 9770 | R | EcosNDM5ORF9185P (100% identity) | Eco1283ORF9770P | |
| 9775 | M48 family peptidase | |||
| 22305 | IS3 family transposase | |||
| 22310 | R | EcotcmA3ORF16550P (100% identity) | Eco1283ORF22330P | |
| 22315 | DNA-processing protein DprA | |||
| 22320 | RecQ family ATP-dependent DNA helicase | |||
| 22325 | S | S.EcotcmA3ORF16550P (100% identity) | S.Eco1283ORF22330P | |
| 22330 | M | M.Pre393ORF2750P (100% identity) | M.Eco1283ORF22330P | |
| 22335 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1955 | protein DamX | |||
| 1960 | M | DNA adenine methylase | GATC | M.Eco1283DamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 2555 | transporter | |||
| 2560 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1283ORF2560P |
| 2565 | Fis family transcriptional regulator | |||
| 9410 | phosphohydrolase | |||
| 9415 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco1283DcmP |
| 9420 | V | V.EcosEC7DcmP (100% identity) | V.Eco1283DcmP | |
| 9425 | drug/metabolite exporter YedA | |||
| 15350 | endonuclease | |||
| 15355 | M | M.Kpn80148ORFEP (99% identity) | GATC | M.Eco1283ORF15355P |
| 15360 | 75 aa hypothetical protein | |||
| 18715 | phage holin, lambda family | |||
| 18720 | M | M.SflSTLE1ORF5465P (100% identity) | M.Eco1283ORF18720P | |
| 18725 | 67 aa hypothetical protein | |||
| plasmid p109 | ||||
| 24080 | 0 aa hypothetical protein | |||
| 24085 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco1283ORF24085P | |
| 24090 | 73 aa hypothetical protein | |||
| plasmid p92 | ||||
| 25305 | 0 aa hypothetical protein | |||
| 25310 | M | M.SspPIBORF23080P (100% identity) | M.Eco1283ORF25310P | |
| 25315 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18545 | 0 aa hypothetical protein | |||
| 18550 | R | Ecop10BGmrSDP (100% identity) | Eco1283GmrSDP | |
| 18555 | integrase | |||
| 20760 | HNH endonuclease | |||
| 20765 | R | SflSTLE4McrCP (100% identity) | Eco1283McrCP | |
| 20770 | R | SflSTLE4McrBP (30% identity) | Eco1283McrBP | |
| 20775 | IS1 family transposase | |||