Sphingobium species C1 |
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Putative Sphingobium species C1 RM systems
Ref: Song,D. et al. unpublished
REBASE ref # 25078
Complete sequence: 3,058,963 bp
GenBank #: CP022745
REBASE acronym: SspC1
Org_num: 25766
All begin CJD35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5210 | metal-dependent hydrolase | |||
| 5215 | R | SspC33ORF13590P (93% identity) | SspC1ORF5240P | |
| 5220 | sporadically distributed protein, TIGR04141 | |||
| 5225 | 112 aa hypothetical protein | |||
| ??? | S | S.SspC33ORF13590P (51% identity) | S1.SspC1ORF5240P | |
| ??? | S | S.Telox9ORF10030P (27% identity) | S2.SspC1ORF5240P | |
| 5240 | M | M.SspC33ORF13590P (95% identity) | M.SspC1ORF5240P | |
| 5245 | 207 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 790 | DNA-binding response regulator | |||
| 800 | RM | SxeQYYORFAP (99% identity) | SspC1ORF800P | |
| 805 | sugar kinase | |||
| 5525 | helicase | |||
| 5530 | RM | Hsp19H1ORF6575P (66% identity) | SspC1ORF5530P | |
| 5535 | 645 aa hypothetical protein | |||
| 5535 | 645 aa hypothetical protein | |||
| 5540 | R | Rsp510ORF33424P (57% identity) | SspC1ORF5540P | |
| 5545 | 72 aa hypothetical protein | |||
| 10970 | transcriptional regulator | |||
| 10975 | M | M.SxeQYYORFCP (100% identity) | M.SspC1ORF10975P | |
| 10980 | dihydropteroate synthase | |||
| 11340 | 346 aa hypothetical protein | |||
| 11345 | M | M.SheMHORFDP (84% identity) | M.SspC1ORF11345P | |
| 11350 | 96 aa hypothetical protein | |||
| 13595 | helicase | |||
| 13600 | M | M.SspTCM1ORF6410P (94% identity) | M.SspC1ORF13600P | |
| 13605 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5100 | 235 aa hypothetical protein | |||
| 5105 | R | SspAAP5McrCP (69% identity) | SspC1McrCP | |
| 5110 | R | Exi204McrB2P (61% identity) | SspC1McrBP | |
| 5115 | 361 aa hypothetical protein | |||