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Putative Nitrosococcus halophilus Nc4 RM systems
Ref: Campbell,M.A. et al. unpublished
REBASE ref # 11633
Sequence length: | GenBank #: | |
Chromosome: | 4,079,427 bp | CP001798 (NC_013960) |
plasmid pNHAL01: | 65,833 bp | CP001799 (NC_013958) |
REBASE acronym: NhaNc4
Org_num: 5890
All begin Nhal_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
750 | killer suppression protein HigA, putative | |||
751 | M | M.NwaD1FHSORF560P (96% identity) | M.NhaNc4ORF751P | |
752 | S | S.PbaE5571ORF10075P (47% identity) | S.NhaNc4ORF751P | |
753 | transcriptional regulator | |||
754 | R | NwaD1FHSORF560P (96% identity) | NhaNc4ORF751P | |
755 | guanylate kinase | |||
891 | DNA polymerase beta domain protein region | |||
892 | R | AprV6ORF6525P (89% identity) | NhaNc4ORF897P | |
893 | 157 aa hypothetical protein | |||
894 | 236 aa conserved hypothetical protein | |||
895 | 337 aa hypothetical protein | |||
896 | S | S.Ssp33300ORF3411P (25% identity) | S.NhaNc4ORF897P | |
897 | M | M.AfeV8ORF8375P (89% identity) | M.NhaNc4ORF897P | |
898 | 58 aa conserved hypothetical protein | |||
1038 | protein of unknown function DUF29 | |||
1039 | M | M.NwaD1FHSORF18385P (83% identity) | M.NhaNc4ORF1039P | |
1040 | S | S1.TlaMK1ORF330P (43% identity) | S.NhaNc4ORF1039P | |
1041 | 235 aa conserved hypothetical protein | |||
1042 | phage P1-related protein | |||
1043 | 151 aa hypothetical protein | |||
1044 | R | NwaD1FHSORF18385P (92% identity) | NhaNc4ORF1039P | |
1045 | protein of unknown function DUF45 | |||
1983 | 61 aa hypothetical protein | |||
1984 | M | M.NwaD1FHSORF13790P (88% identity) | M.NhaNc4ORF1984P | |
1985 | S | S.Nsp7107ORF4406P (29% identity) | S.NhaNc4ORF1984P | |
1986 | filamentation induced by cAMP protein Fic | |||
1987 | R | NwaD1FHSORF13790P (97% identity) | NhaNc4ORF1984P | |
1988 | transposase IS116/IS110/IS902 family protein | |||
3401 | DSBA oxidoreductase | |||
3402 | M | M.NspDNFORF1172P (69% identity) | M.NhaNc4ORF3402P | |
3403 | S | S.Fli132ORF380P (41% identity) | S.NhaNc4ORF3402P | |
3404 | 258 aa hypothetical protein | |||
3405 | 217 aa conserved hypothetical protein | |||
3406 | Appr-1-p processing domain protein | |||
3407 | R | GurRORF4043P (77% identity) | NhaNc4ORF3402P | |
3409 | protein of unknown function DUF45 | |||
3782 | 41 aa hypothetical protein | |||
3783 | R | type I site-specific restriction-modification system, R subunit | NhaNc4ORF3783P | |
3784 | PAS sensor protein | |||
plasmid pNHAL01 | ||||
3962 | R | Pba8534ORF64480P (56% identity) | NhaNc4ORF3964P | |
3963 | S | S.Ego125ORFBP (33% identity) | S.NhaNc4ORF3964P | |
3964 | M | M.Pba8534ORF64480P (75% identity) | M.NhaNc4ORF3964P | |
3965 | addiction module killer protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
644 | 124 aa conserved hypothetical protein | |||
645 | M | M.NwaD1FHSORF1055P (95% identity) | M.NhaNc4ORF645P | |
646 | Ribonucleoside-diphosphate reductase | |||
989 | 119 aa conserved hypothetical protein | |||
990 | M | M.Mcr10ORFBP (70% identity) | M.NhaNc4ORF990P | |
991 | R | MspN04ORF16890P (70% identity) | NhaNc4ORF990P | |
992 | 353 aa hypothetical protein | |||
3422 | thioredoxin reductase | |||
3423 | M | M.NwaD1FHSORF7040P (96% identity) | GATC | M.NhaNc4DamP |
3424 | 89 aa conserved hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3376 | 439 aa conserved hypothetical protein | |||
3377 | M | M.NwaCORF2929P (40% identity) | M.NhaNc4ORF3377P | |
3378 | R | MspA3ORFGP (56% identity) | NhaNc4ORF3377P | |
3379 | pseudogene | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
788 | 319 aa hypothetical protein | |||
789 | R | NhaNc4Mrr2P (43% identity) | NhaNc4MrrP | |
790 | 114 aa conserved hypothetical protein | |||
2787 | aconitate hydratase 2 | |||
2788 | R | Zfo19928McrBP (22% identity) | NhaNc4McrBP | |
2789 | ThiJ/PfpI domain protein | |||
plasmid pNHAL01 | ||||
4000 | 132 aa conserved hypothetical protein | |||
4001 | R | NwaCMrrP (83% identity) | NhaNc4Mrr2P | |
4002 | 103 aa hypothetical protein |