Paraburkholderia species BN5 |
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Putative Paraburkholderia species BN5 RM systems
Ref: Lee,Y. unpublished
REBASE ref # 25053
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,378,888 bp | CP022989 |
| chromosome 2: | 2,992,211 bp | CP022990 |
| plasmid pBN2: | 489,416 bp | CP022992 |
| plasmid pBN4: | 152,437 bp | CP022994 |
| plasmid pBN5: | 39,532 bp | CP022995 |
| plasmid pBN6: | 27,494 bp | CP022996 |
REBASE acronym: PspBNS
Org_num: 25702
All begin CJU94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13020 | 327 aa hypothetical protein | |||
| 13025 | M | M.PspXJJ1ORF18730P (93% identity) | M.PspBNSORF13025P | |
| 13030 | S | S1.Psp059ORF19020P (70% identity) | S.PspBNSORF13025P | |
| 13035 | R | PspXJJ1ORF18730P (92% identity) | PspBNSORF13025P | |
| 13040 | 1070 aa hypothetical protein | |||
| plasmid pBN6 | ||||
| 40595 | 63 aa hypothetical protein | |||
| 40600 | S | S.CspSL2Y3ORFAP (60% identity) | S.PspBNSORF40605P | |
| 40605 | M | M.Bst735ORF45P (93% identity) | M.PspBNSORF40605P | |
| 40610 | R | Bst735ORF45P (92% identity) | PspBNSORF40605P | |
| 40620 | 100 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 19725 | 108 aa hypothetical protein | |||
| 19730 | M | M.PspMSB31ORF1163P (96% identity) | M.PspBNSORF19730P | |
| 19735 | V | V.PspFT54ORF14500P (94% identity) | V.PspBNSORF19730P | |
| 19740 | YbhB/YbcL family Raf kinase inhibitor-like | |||
| chromosome 2 | ||||
| 29250 | tryptophan synthase subunit beta | |||
| 29255 | M | M.PspFT54ORF32130P (97% identity) | M.PspBNSORF29255P | |
| 29260 | tryptophan synthase subunit alpha | |||
| plasmid pBN2 | ||||
| 36270 | 106 aa hypothetical protein | |||
| 36275 | RM | Psp92ORFBP (64% identity) | PspBNSORF36275AP | |
| 36280 | IS5/IS1182 family transposase | |||
| 36285 | RM | lactate dehydrogenase | PspBNSORF36275BP | |
| 36290 | DEAD/DEAH box helicase | |||
| 37435 | 212 aa hypothetical protein | |||
| ??? | M | M.AspSK2ORFJP (76% identity) | M.PspBNSORF37445P | |
| 37450 | 203 aa hypothetical protein | |||
| 36085 | 95 aa hypothetical protein | |||
| 36090 | M | M.AspSK2ORFAP (97% identity) | M.PspBNSORF36090P | |
| 36095 | 139 aa hypothetical protein | |||
| plasmid pBN4 | ||||
| 39595 | DNA-binding protein | |||
| 39600 | M | M.Pho17164ORF52715P (98% identity) | M.PspBNSORF39600P | |
| 39605 | 65 aa hypothetical protein | |||
| plasmid pBN5 | ||||
| 40445 | plasmid-related protein | |||
| 40450 | M | M.Bgl951ORF38825P (97% identity) | M.PspBNSORF40450P | |
| 40455 | R | Bgl951ORF38825P (98% identity) | PspBNSORF40450P | |
| 40460 | V | V.Bgl951ORF38825P (95% identity) | V.PspBNSORF40450P | |
| 40465 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5225 | IS256 family transposase | |||
| 5230 | R | BpsW111MrrP (87% identity) | PspBNSMrrP | |
| 5235 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||