Kingella negevensis SW7208426 |
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Putative Kingella negevensis SW7208426 RM systems
Ref:
REBASE ref # 24524
Contig set: 2,159,611 bp
GenBank #: FXBH00000000 (NZ_FXBH00000000)
REBASE acronym: Kne8426
Org_num: 25228
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5 | 60 aa hypothetical protein | |||
| ??? | M | M.KneD2292ORF11485P (98% identity) | M.Kne8426ORFHP | |
| 9 | RNA polymerase sigma factor | |||
| 17 | Diaminopimelate decarboxylase | |||
| 19 | S | S.KneD2292ORF635P (68% identity) | S.Kne8426ORFBP | |
| 21 | 223 aa hypothetical protein | |||
| 298 | N-6 DNA methylase | |||
| 299 | S | S.KneD2292ORF7775P (99% identity) | S.Kne8426ORFJP | |
| 301 | 68 aa hypothetical protein | |||
| 368 | 73 aa hypothetical protein | |||
| 369 | S | S.KneD2292ORF6875P (94% identity) | S.Kne8426ORFMP | |
| 370 | 64 aa hypothetical protein | |||
| 686 | Threonine--tRNA ligase | |||
| 688 | R | Kne8426ORFHBP (98% identity) | Kne8426ORFKBP | |
| 689 | Uncharacterized protein | |||
| 690 | R | Kne8426ORFHAP (99% identity) | Kne8426ORFKAP | |
| 691 | Restriction endonuclease subunit S | |||
| 690 | DEAD/DEAH box helicase | |||
| 691 | S | S.Kne8426ORFHP (47% identity) | S.Kne8426ORFLP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | Ferric ABC superfamily ATP binding cassette transporter, membrane protein | |||
| 11 | M | M.Mno869ORF3790P (71% identity) | M.Kne8426ORFEP | |
| 12 | Protein-disulfide reductase | |||
| 15 | 128 aa hypothetical protein | |||
| 16 | M | M2.Kki66ORF6855P (96% identity) | M1.Kne8426ORFDP | |
| 18 | R | Nmu758ORF7870P (70% identity) | Kne8426ORFDP | |
| 20 | M | M.Nmu758ORF7870P (89% identity) | M2.Kne8426ORFDP | |
| 21 | Uncharacterized protein | |||
| 82 | 66 aa hypothetical protein | |||
| 83 | RM | Kki434ORFBP (79% identity) | Kne8426ORFCP | |
| 88 | 111 aa hypothetical protein | |||
| 110 | Ribosomal RNA small subunit methyltransferase B | |||
| 113 | RM | Kki23332ORF6375P (98% identity) | Kne8426ORFAP | |
| 118 | Methionyl-tRNA formyltransferase | |||
| 297 | Uncharacterized protein | |||
| 298 | RM | KneD2292ORF7775P (98% identity) | Kne8426ORFIP | |
| 299 | Uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 42 | Site-specific recombinase, phage integrase family | |||
| ??? | M | M.NdeIII (70% identity) | M.Kne8426ORFFP | |
| 46 | R | Kki66ORF10495P (96% identity) | Kne8426ORFFP | |
| 48 | acetyltransferase | |||
| 913 | 71 aa hypothetical protein | |||
| 914 | M | M.KneD2292ORF10430P (93% identity) | M.Kne8426ORFGP | |
| 916 | R | KneD2292ORF10430P (98% identity) | Kne8426ORFGP | |
| 919 | arginine/ornithine antiporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 415 | PilT protein family protein | |||
| 417 | R | Kki66MrrP (100% identity) | Kne8426MrrP | |
| 418 | Phenylalanine--tRNA ligase beta subunit | |||