|
Putative Citrobacter farmeri AUSMDU00008141 RM systems
Ref: Kwong,J.C. et al. unpublished
REBASE ref # 25006
Sequence length: | GenBank #: | |
Chromosome: | 5,130,228 bp | CP022695 |
plasmid pAUSMDU8141-1: | 328,945 bp | CP022696 |
plasmid pAUSMDU8141-2: | 149,207 bp | CP022697 |
plasmid pAUSMDU8141-3: | 107,249 bp | CP022698 |
REBASE acronym: Cfa8141
Org_num: 25606
All begin CI104_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21395 | 95 aa hypothetical protein | |||
21400 | M | M.Cbr1423ORF3370P (99% identity) | M.Cfa8141ORF21400P | |
21405 | S | S2.Cbr1423ORF3370P (51% identity) | S.Cfa8141ORF21400P | |
21410 | R | Cbr1423ORF3370P (100% identity) | Cfa8141ORF21400P | |
21415 | 224 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1800 | cell division protein DamX | |||
1805 | M | M.Cfa24236Dam (100% identity) | M.Cfa8141DamP | |
1810 | ribulose-phosphate 3-epimerase | |||
2340 | DUF2556 domain-containing protein | |||
2345 | M | M.Cbr1423ORF20440P (100% identity) | M.Cfa8141ORF2345P | |
2350 | Fis family transcriptional regulator | |||
3455 | 75 aa hypothetical protein | |||
3460 | M | M.Eho2ORF16025P (99% identity) | M.Cfa8141ORF3460P | |
3465 | endonuclease | |||
6825 | transcriptional regulator | |||
6830 | M | M.Kmi676ORF5120P (81% identity) | M.Cfa8141ORF6830P | |
6835 | replication protein | |||
6840 | 87 aa hypothetical protein | |||
6845 | M | M.SenST203ORF20895P (70% identity) | M.Cfa8141ORF6845P | |
6850 | 129 aa hypothetical protein | |||
9395 | 162 aa hypothetical protein | |||
9400 | M | M.Cam133355ORF8530P (92% identity) | M.Cfa8141ORF9400P | |
9405 | 290 aa hypothetical protein | |||
10705 | 177 aa hypothetical protein | |||
10710 | M | M.SglORF828P (100% identity) | M.Cfa8141ORF10710P | |
10715 | 116 aa hypothetical protein | |||
11065 | GntR family transcriptional regulator | |||
11070 | M | M2.CamC3HORF14225P (97% identity) | M.Cfa8141ORF11070P | |
11075 | DNA cytosine methyltransferase | |||
11070 | phage N-6-adenine-methyltransferase | |||
11075 | M | M.CspNIH10ORF27990P (98% identity) | M.Cfa8141ORF11075P | |
11080 | LexA family transcriptional regulator | |||
11110 | 87 aa hypothetical protein | |||
11115 | M | M.Cam165ORF17645P (96% identity) | M.Cfa8141ORF11115P | |
11120 | 104 aa hypothetical protein | |||
15945 | drug/metabolite exporter YedA | |||
15950 | V | V.Cbr1423DcmP (100% identity) | V.Cfa8141DcmP | |
15955 | M | M.Cbr1423DcmP (100% identity) | M.Cfa8141DcmP | |
15960 | phosphohydrolase | |||
plasmid pAUSMDU8141-1 | ||||
26255 | nuclease | |||
26260 | M | M.Ssp15303DcmP (100% identity) | M.Cfa8141Dcm2P | |
26265 | 55 aa hypothetical protein | |||
27000 | 106 aa hypothetical protein | |||
27005 | M | M.Ssp15303ORFDP (100% identity) | M.Cfa8141ORF27005P | |
27010 | 202 aa hypothetical protein | |||
27140 | DNA-binding protein | |||
27145 | M | M.Ssp15303ORFEP (100% identity) | M.Cfa8141ORF27145P | |
27150 | 284 aa hypothetical protein | |||
plasmid pAUSMDU8141-2 | ||||
27905 | 73 aa hypothetical protein | |||
27910 | M | M.Kpni11ayORF5166P (100% identity) | M1.Cfa8141ORF27910P | |
27915 | DNA breaking-rejoining protein | |||
27920 | peptidase | |||
27925 | DNA polymerase V subunit UmuC | |||
27930 | integrase | |||
27935 | integrase | |||
27940 | R | SmaBWH35ORF16650P (100% identity) | CCWGG | Cfa8141ORF27910P |
27945 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M2.Cfa8141ORF27910P |
27950 | AAA family ATPase | |||
plasmid pAUSMDU8141-3 | ||||
28080 | 0 aa hypothetical protein | |||
??? | M | M.KpnPtORF27585P (100% identity) | M.Cfa8141ORF28085P | |
28090 | 73 aa hypothetical protein |