Escherichia coli CDC#03-98 |
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Putative Escherichia coli CDC#03-98 RM systems
Ref: Trees,E. and Sabol,A. unpublished
REBASE ref # 25017
| Sequence length: | GenBank #: | |
| Chromosome: | 5,406,069 bp | CP022689 |
| plasmid p0157: | 92,032 bp | CP022688 |
REBASE acronym: Eco0398
Org_num: 25605
All begin RM34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7610 | DUF262 domain-containing protein | |||
| 7615 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco0398IP |
| 7620 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco0398I |
| 7625 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco0398I |
| 7630 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 830 | NinE family protein | |||
| 835 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco0398ORF835P |
| 840 | recombination protein NinB | |||
| 7880 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco0398II |
| 7885 | ATP-dependent helicase | |||
| 13415 | protein DamX | |||
| 13420 | M | DNA adenine methylase | GATC | M.Eco0398DamP |
| 13425 | ribulose-phosphate 3-epimerase | |||
| 13965 | transporter | |||
| 13970 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco0398III |
| 13975 | Fis family transcriptional regulator | |||
| 21400 | phosphohydrolase | |||
| 21405 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0398Dcm |
| 21410 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco0398DcmP |
| 21415 | drug/metabolite exporter YedA | |||
| 25125 | lipoprotein | |||
| 25130 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco0398ORF25130P | |
| 25145 | 61 aa hypothetical protein | |||
| 26065 | 81 aa hypothetical protein | |||
| 26070 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco0398ORF26070P | |
| 26075 | 329 aa hypothetical protein | |||
| plasmid p0157 | ||||
| 225 | 73 aa hypothetical protein | |||
| 230 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco0398ORF230P | |
| 235 | 101 aa hypothetical protein | |||