Putative Neisseria gonorrhoeae RIVM0640 RM systems
Ref: Schouls,L. et al. unpublished
REBASE ref # 24970
Complete sequence: 2,230,041 bp
GenBank #: CP019467
REBASE acronym: Ngo640
Org_num: 25448
All begin BZG34_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4120 | ABC transporter | |||
4125 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo640ORF4125P |
4130 | 279 aa hypothetical protein | |||
4135 | 186 aa hypothetical protein | |||
4140 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo640ORF4125P |
4145 | DNA-binding protein | |||
4150 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo640ORF4125P |
4155 | AAA family ATPase | |||
5740 | ATP-dependent Clp protease ATP-binding subunit | |||
5745 | R | NgoNCORF566P (100% identity) | Ngo640ORF5765P | |
5750 | S | S2.NgoWSII (100% identity) | S1.Ngo640ORF5765P | |
5755 | S | S.Ngo13800ORF512P (50% identity) | S2.Ngo640ORF5765P | |
5760 | DNA damage-inducible protein D | |||
5765 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo640ORF5765P | |
5770 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
45 | leucine--tRNA ligase | |||
??? | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo640ORFBP |
??? | M | M.NgoWPORF8P (100% identity) | M.Ngo640ORFBP | |
65 | 151 aa hypothetical protein | |||
1290 | 48 aa hypothetical protein | |||
??? | M | M.NgoJH7ORFGP (100% identity) | M.Ngo640ORFAP | |
??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo640ORFAP | |
1315 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo640ORFAP | |
1320 | replication initiation factor | |||
2835 | 5-(carboxyamino)imidazole ribonucleotide | |||
2840 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo640ORF2845P |
2845 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo640ORF2845P |
2850 | anthranilate synthase component I | |||
4270 | 3-isopropylmalate dehydratase small subunit | |||
4275 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo640ORF4275P |
4280 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo640ORF4275P |
4285 | 3-isopropylmalate dehydrogenase | |||
5990 | 0 aa hypothetical protein | |||
5995 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo640ORF5995P |
6000 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo640ORF5995P |
6005 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo640ORF5995P | |
6010 | uroporphyrinogen decarboxylase | |||
6035 | 0 aa hypothetical protein | |||
6040 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo640ORF6045P |
6045 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo640ORF6045P |
6050 | 215 aa hypothetical protein | |||
6335 | phenylalanine--tRNA ligase subunit beta | |||
6340 | R | NgoWSORF391P (100% identity) | Ngo640ORF6355P | |
??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo640ORF6355P | |
6355 | V | V.NgoWSORF391P (100% identity) | V.Ngo640ORF6355P | |
6360 | phenylalanine--tRNA ligase subunit alpha | |||
7045 | excinuclease ABC subunit A | |||
7050 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo640ORF7055P |
7055 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo640ORF7055P |
7060 | transposase | |||
11000 | cysteine--tRNA ligase | |||
11005 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo640ORF11010P |
11010 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo640ORF11010P |
11015 | GTPase ObgE | |||
11605 | RNA-binding transcriptional accessory protein | |||
11610 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo640ORF11610P |
11615 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo640ORF11610P |
11620 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo640ORF11610P |
11625 | 93 aa hypothetical protein | |||
12235 | ribosome-recycling factor | |||
12240 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo640ORF12240P |
12245 | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo640ORF12240P |
12250 | group 2 glycosyl transferase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4475 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.NgoSH205ORFLP (99% identity) | M.Ngo640ORF4480P | |
4490 | R | NgoNCORF1272P (100% identity) | Ngo640ORF4480P | |
4495 | alpha-hydroxy-acid oxidizing enzyme | |||
4980 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
4985 | R | NgoWPIIP (100% identity) | CCACC | Ngo640ORF4990P |
4990 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo640ORF4990P |
4995 | peptidylprolyl isomerase |