Neisseria gonorrhoeae RIVM0610 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae RIVM0610 RM systems
Ref: Schouls,L. et al. unpublished
REBASE ref # 24970
Complete sequence: 2,229,240 bp
GenBank #: CP019466
REBASE acronym: Ngo610
Org_num: 25436
All begin BZG33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2965 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2970 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo610ORF2970P | |
| 2975 | DNA damage-inducible protein D | |||
| 2980 | S | S.NgoJH9ORFNP (100% identity) | GCANNNNNNNNTGC | S1.Ngo610ORF2970P |
| 2985 | S | S2.NgoWSII (100% identity) | S2.Ngo610ORF2970P | |
| 2990 | R | NgoNCORF566P (100% identity) | Ngo610ORF2970P | |
| 2995 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6040 | ABC transporter | |||
| 6045 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo610ORF6045P |
| 6050 | 279 aa hypothetical protein | |||
| 6055 | 186 aa hypothetical protein | |||
| 6060 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo610ORF6045P |
| 6065 | DNA-binding protein | |||
| 6070 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo610ORF6045P |
| 6075 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| ??? | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo610ORFAP |
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M.Ngo610ORFAP |
| 65 | 151 aa hypothetical protein | |||
| 1290 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoWSORF1801P (100% identity) | M.Ngo610ORF1295P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo610ORF1295P | |
| 1315 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo610ORF1295P | |
| 1320 | replication initiation factor | |||
| 1680 | transposase | |||
| 1685 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo610ORF1685P |
| 1690 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo610ORF1685P |
| 1695 | excinuclease ABC subunit A | |||
| 2375 | phenylalanine--tRNA ligase subunit alpha | |||
| 2380 | V | V.NgoWSORF391P (100% identity) | V.Ngo610ORF2385P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo610ORF2385P | |
| 2395 | R | NgoWSORF391P (100% identity) | Ngo610ORF2385P | |
| 2400 | phenylalanine--tRNA ligase subunit beta | |||
| 2685 | 215 aa hypothetical protein | |||
| 2690 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo610ORF2690P |
| 2695 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo610ORF2690P |
| 2700 | 0 aa hypothetical protein | |||
| 2725 | uroporphyrinogen decarboxylase | |||
| 2730 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo610ORF2740P | |
| 2735 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo610ORF2740P |
| 2740 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo610ORF2740P |
| 2745 | 90 aa hypothetical protein | |||
| 4760 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4765 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo610ORF4770P |
| 4770 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo610ORF4770P |
| 4775 | anthranilate synthase component I | |||
| 6185 | 3-isopropylmalate dehydratase small subunit | |||
| 6190 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo610ORF6190P |
| 6195 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo610ORF6190P |
| 6200 | 3-isopropylmalate dehydrogenase | |||
| 10960 | cysteine--tRNA ligase | |||
| 10965 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo610ORF10970P |
| 10970 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo610ORF10970P |
| 10975 | GTPase ObgE | |||
| 11565 | RNA-binding transcriptional accessory protein | |||
| 11570 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo610ORF11570P |
| 11575 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo610ORF11570P |
| 11580 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo610ORF11570P |
| 11585 | 93 aa hypothetical protein | |||
| 12205 | ribosome-recycling factor | |||
| 12210 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo610ORF12210P |
| 12215 | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo610ORF12210P |
| 12220 | group 2 glycosyl transferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6390 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.NgoSW0015ORF3255P (22% identity) | M.Ngo610ORF6395AP | |
| 6400 | M | M.NgoSW0259ORF3235P (100% identity) | M.Ngo610ORF6395BP | |
| 6405 | R | NgoNCORF1272P (100% identity) | Ngo610ORF6395P | |
| 6410 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6895 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6900 | R | NgoWPIIP (100% identity) | CCACC | Ngo610ORF6905P |
| 6905 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo610ORF6905P |
| 6910 | peptidylprolyl isomerase | |||