Lactobacillus paracasei DmW_181 |
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Putative Lactobacillus paracasei DmW_181 RM systems
Ref: Hammer,A.J. et al. unpublished
REBASE ref # 24534
Contig set: 3,201,429 bp
GenBank #: NDXH00000000 (NZ_NDXH00000000)
REBASE acronym: Lpa181
Org_num: 24633
All begin B9J76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8030 | 61 aa hypothetical protein | |||
| 8035 | M | M.LpaZFM54ORF14575P (36% identity) | M.Lpa181ORF8035P | |
| 8040 | S | S1.LpaQKORFAP (46% identity) | S1.Lpa181ORF8035P | |
| 8045 | site-specific integrase | |||
| 8050 | S | S2.LpaM56ORF10735P (99% identity) | S2.Lpa181ORF8035P | |
| 8055 | 711 aa hypothetical protein | |||
| 5730 | 70 aa hypothetical protein | |||
| 5735 | S | S.LpaCLWORF2P (100% identity) | S.Lpa181ORF5735P | |
| 5740 | 215 aa hypothetical protein | |||
| 15205 | 188 aa hypothetical protein | |||
| 15210 | R | LpaZFM54ORF14575P (100% identity) | Lpa181ORF15215P | |
| 15215 | M | M.LpaZFM54ORF14575P (63% identity) | M.Lpa181ORF15215P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14495 | IS6 family transposase | |||
| 14500 | R | LmeE16ORF7935P (80% identity) | Lpa181ORF14505P | |
| 14505 | M | M.Lca5bORF4085P (79% identity) | M.Lpa181ORF14505P | |
| 5820 | 73 aa hypothetical protein | |||
| 5825 | M | M.LpaALAC4ORF1045P (99% identity) | M.Lpa181ORF5825P | |
| 5830 | 108 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5750 | IS30 family transposase | |||
| 5755 | M | 165 aa hypothetical protein | M.Lpa181ORF5755P | |
| 5760 | R | Lpa3423ORF2145P (98% identity) | Lpa181ORF5755P | |
| 5765 | 347 aa hypothetical protein | |||
| 3455 | 234 aa hypothetical protein | |||
| 3460 | M | M.Lpa3423ORF2145P (71% identity) | M.Lpa181ORF3460P | |
| 3465 | IS30 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8050 | type I restriction endonuclease subunit S | |||
| 8055 | 711 aa hypothetical protein | |||