Ref: Mac Aogain,M. et al. unpublished

REBASE ref # 24516

Contig set: 2,053,541 bp

GenBank #: NAGJ00000000 (NZ_NAGJ00000000)

REBASE acronym: NgoJH4

Org_num: 24587

 

All begin ORF_

Type I
ORF Gene Most similar Specificity Name
 
1 M M.NgoWSI (100% identity) M.NgoJH4ORFAP
4 143 aa hypothetical protein
 
104 Uncharacterized protein
106 R NgoWNIIP (100% identity) GCANNNNNNNNTGC NgoJH4ORFGP
112 S S1.NgoG7944ORFPP (100% identity) S1.NgoJH4ORFGP
115 S S.NgoWNII (50% identity) GCANNNNNNNNTGC S2.NgoJH4ORFGP
117 74 aa hypothetical protein
118 61 aa hypothetical protein
119 DNA-damage-inducible protein D
120 104 aa hypothetical protein
121 117 aa hypothetical protein
123 M M.NgoWSII (100% identity) GCANNNNNNNNTGC M.NgoJH4ORFGP
126 Uncharacterized protein
 
90 131 aa hypothetical protein
91 R NgoWPIP (100% identity) NgoJH4ORFOP
96 68 aa hypothetical protein
97 Uncharacterized protein
98 S S.NgoWPI (61% identity) S.NgoJH4ORFOP
Type II
ORF Gene Most similar Specificity Name
 
2 3-isopropylmalate dehydrogenase
6 R NgoWSORF784P (100% identity) GGNNCC NgoJH4ORFBP
10 M Cytosine-specific methyltransferase GGNNCC M.NgoJH4ORFBP
 
5 86 aa hypothetical protein
??? M M.NgoJH7ORFGP (100% identity) M.NgoJH4ORFNP
??? R NgoTFGB2ORF1219P (100% identity) NgoJH4ORFNP
14 V V.Ngos1291ORF65P (100% identity) V.NgoJH4ORFNP
18 Replication initiation factor
 
16 N5-carboxyaminoimidazole ribonucleotide synthase
20 R NgoWSORF1056P (100% identity) GCCGGC NgoJH4ORFDP
22 M M.Ngos1291ORF10080P (100% identity) GCCGGC M.NgoJH4ORFDP
23 Anthranilate synthase component 1
 
23 GTPase Obg
27 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.NgoJH4ORFFP
28 R NgoJH9ORFDP (100% identity) NgoJH4ORFFP
29 Cysteine--tRNA ligase
 
15 UvrABC system protein A
24 R NgoJH14ORFDP (100% identity) CCGCGG NgoJH4ORFEP
27 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoJH4ORFEP
29 Uncharacterized protein
 
45 105 aa hypothetical protein
48 R NgoWFIIP (100% identity) GGTGA NgoJH4ORFHP
49 M M1.Ngos1291ORF4080P (100% identity) GGTGA M1.NgoJH4ORFHP
50 M M1.NgoWSIII (100% identity) GGTGA M2.NgoJH4ORFHP
51 Uncharacterized protein
 
66 Phenylalanine--tRNA ligase beta subunit
70 R NgoWSORF391P (100% identity) NgoJH4ORFQP
??? M M.NgoWSORF391P (100% identity) M.NgoJH4ORFQP
76 V V.NgoWSORF391P (100% identity) V.NgoJH4ORFQP
78 Phenylalanine--tRNA ligase alpha subunit
 
60 Ribosome-recycling factor
65 M M.NgoJH7ORFNP (100% identity) GGCC M.NgoJH4ORFMP
??? R NgoWSORF2276P (100% identity) GGCC NgoJH4ORFMP
73 Membrane protein
 
114 Uncharacterized protein
??? M M.NgoWPORF8P (100% identity) M.NgoJH4ORFPP
120 Restriction endonuclease
121 R NgoWSORF8P (91% identity) NgoJH4ORFPP
 
294 Uncharacterized protein
295 M M.NgoWSORF459P (100% identity) GCSGC M.NgoJH4ORFJP
297 R Ngos1291ORF7560P (100% identity) GCSGC NgoJH4ORFJP
298 H H.NgoWSORF459P (100% identity) H.NgoJH4ORFJP
299 112 aa hypothetical protein
 
294 M M2.NgoSH203ORFHP (100% identity) M.NgoJH4ORFIP
295 Cytosine-specific methyltransferase
 
322 Chitinase
324 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.NgoJH4ORFKP
325 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA NgoJH4ORFKP
Type III
ORF Gene Most similar Specificity Name
 
1 M M.NgoWSORF749P (32% identity) M.NgoJH4ORFLP
4 R NgoWPORF742P (100% identity) NgoJH4ORFLP
6 Uncharacterized protein
 
1 M M.NgoSH240ORFNP (100% identity) M.NgoJH4ORFCP
6 R Ngos1291ORF8455P (100% identity) CCACC NgoJH4ORFCP
9 tRNA 2-thiocytidine biosynthesis protein TtcA