Neisseria gonorrhoeae NGSJH4 |
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Putative Neisseria gonorrhoeae NGSJH4 RM systems
Ref: Mac Aogain,M. et al. unpublished
REBASE ref # 24516
Contig set: 2,053,541 bp
GenBank #: NAGJ00000000 (NZ_NAGJ00000000)
REBASE acronym: NgoJH4
Org_num: 24587
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.NgoWSI (100% identity) | M.NgoJH4ORFAP | |
| 4 | 143 aa hypothetical protein | |||
| 104 | Uncharacterized protein | |||
| 106 | R | NgoWNIIP (100% identity) | GCANNNNNNNNTGC | NgoJH4ORFGP |
| 112 | S | S1.NgoG7944ORFPP (100% identity) | S1.NgoJH4ORFGP | |
| 115 | S | S.NgoWNII (50% identity) | GCANNNNNNNNTGC | S2.NgoJH4ORFGP |
| 117 | 74 aa hypothetical protein | |||
| 118 | 61 aa hypothetical protein | |||
| 119 | DNA-damage-inducible protein D | |||
| 120 | 104 aa hypothetical protein | |||
| 121 | 117 aa hypothetical protein | |||
| 123 | M | M.NgoWSII (100% identity) | GCANNNNNNNNTGC | M.NgoJH4ORFGP |
| 126 | Uncharacterized protein | |||
| 90 | 131 aa hypothetical protein | |||
| 91 | R | NgoWPIP (100% identity) | NgoJH4ORFOP | |
| 96 | 68 aa hypothetical protein | |||
| 97 | Uncharacterized protein | |||
| 98 | S | S.NgoWPI (61% identity) | S.NgoJH4ORFOP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 3-isopropylmalate dehydrogenase | |||
| 6 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoJH4ORFBP |
| 10 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoJH4ORFBP |
| 5 | 86 aa hypothetical protein | |||
| ??? | M | M.NgoJH7ORFGP (100% identity) | M.NgoJH4ORFNP | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | NgoJH4ORFNP | |
| 14 | V | V.Ngos1291ORF65P (100% identity) | V.NgoJH4ORFNP | |
| 18 | Replication initiation factor | |||
| 16 | N5-carboxyaminoimidazole ribonucleotide synthase | |||
| 20 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoJH4ORFDP |
| 22 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoJH4ORFDP |
| 23 | Anthranilate synthase component 1 | |||
| 23 | GTPase Obg | |||
| 27 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoJH4ORFFP |
| 28 | R | NgoJH9ORFDP (100% identity) | NgoJH4ORFFP | |
| 29 | Cysteine--tRNA ligase | |||
| 15 | UvrABC system protein A | |||
| 24 | R | NgoJH14ORFDP (100% identity) | CCGCGG | NgoJH4ORFEP |
| 27 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoJH4ORFEP |
| 29 | Uncharacterized protein | |||
| 45 | 105 aa hypothetical protein | |||
| 48 | R | NgoWFIIP (100% identity) | GGTGA | NgoJH4ORFHP |
| 49 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoJH4ORFHP |
| 50 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoJH4ORFHP |
| 51 | Uncharacterized protein | |||
| 66 | Phenylalanine--tRNA ligase beta subunit | |||
| 70 | R | NgoWSORF391P (100% identity) | NgoJH4ORFQP | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoJH4ORFQP | |
| 76 | V | V.NgoWSORF391P (100% identity) | V.NgoJH4ORFQP | |
| 78 | Phenylalanine--tRNA ligase alpha subunit | |||
| 60 | Ribosome-recycling factor | |||
| 65 | M | M.NgoJH7ORFNP (100% identity) | GGCC | M.NgoJH4ORFMP |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoJH4ORFMP |
| 73 | Membrane protein | |||
| 114 | Uncharacterized protein | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoJH4ORFPP | |
| 120 | Restriction endonuclease | |||
| 121 | R | Ngos1291ORF5750P (91% identity) | NgoJH4ORFPP | |
| 294 | Uncharacterized protein | |||
| 295 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoJH4ORFJP |
| 297 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoJH4ORFJP |
| 298 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoJH4ORFJP | |
| 299 | 112 aa hypothetical protein | |||
| 322 | Chitinase | |||
| 324 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoJH4ORFKP |
| 325 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoJH4ORFKP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.NgoWSORF749P (32% identity) | M.NgoJH4ORFLP | |
| 4 | R | NgoWPORF742P (100% identity) | NgoJH4ORFLP | |
| 6 | Uncharacterized protein | |||
| 1 | M | M.NgoSH240ORFNP (100% identity) | M.NgoJH4ORFCP | |
| 6 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoJH4ORFCP |
| 9 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||